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KRTAP9-7 (keratin associated protein 9-7)

Identity

Alias_namesKRTAP9L1
keratin associated protein 9-like 1
Alias_symbol (synonym)KAP9.7
Other alias
HGNC (Hugo) KRTAP9-7
LocusID (NCBI) 100505724
Atlas_Id 65141
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 41041318 and ends at 41167743 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KRTAP9-7   18915
Cards
Entrez_Gene (NCBI)KRTAP9-7  100505724  keratin associated protein 9-7
AliasesKAP9.7; KRTAP9L1
GeneCards (Weizmann)KRTAP9-7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:41041318-41167743 [Contig_View]  KRTAP9-7 [Vega]
TCGA cBioPortalKRTAP9-7
AceView (NCBI)KRTAP9-7
Genatlas (Paris)KRTAP9-7
WikiGenes100505724
SOURCE (Princeton)KRTAP9-7
Genetics Home Reference (NIH)KRTAP9-7
Genomic and cartography
GoldenPath hg38 (UCSC)KRTAP9-7  -     chr17:41041318-41167743 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KRTAP9-7  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblKRTAP9-7 - 17q21.2 [CytoView hg19]  KRTAP9-7 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIKRTAP9-7 [Mapview hg19]  KRTAP9-7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001277332
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KRTAP9-7
Gene ExpressionKRTAP9-7 [ NCBI-GEO ]   KRTAP9-7 [ EBI - ARRAY_EXPRESS ]   KRTAP9-7 [ SEEK ]   KRTAP9-7 [ MEM ]
Gene Expression Viewer (FireBrowse)KRTAP9-7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100505724
GTEX Portal (Tissue expression)KRTAP9-7
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MTY7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MTY7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MTY7
Splice isoforms : SwissVarA8MTY7
PhosPhoSitePlusA8MTY7
Domains : Interpro (EBI)KAP   
Domain families : Pfam (Sanger)Keratin_B2_2 (PF13885)   
Domain families : Pfam (NCBI)pfam13885   
Conserved Domain (NCBI)KRTAP9-7
DMDM Disease mutations100505724
Blocks (Seattle)KRTAP9-7
SuperfamilyA8MTY7
Peptide AtlasA8MTY7
IPIIPI00787309   
Protein Interaction databases
DIP (DOE-UCLA)A8MTY7
IntAct (EBI)A8MTY7
BioGRIDKRTAP9-7
STRING (EMBL)KRTAP9-7
ZODIACKRTAP9-7
Ontologies - Pathways
QuickGOA8MTY7
Ontology : AmiGOcytosol  keratinization  keratin filament  
Ontology : EGO-EBIcytosol  keratinization  keratin filament  
NDEx NetworkKRTAP9-7
Atlas of Cancer Signalling NetworkKRTAP9-7
Wikipedia pathwaysKRTAP9-7
Orthology - Evolution
OrthoDB100505724
Phylogenetic Trees/Animal Genes : TreeFamKRTAP9-7
HOVERGENA8MTY7
HOGENOMA8MTY7
Homologs : HomoloGeneKRTAP9-7
Homology/Alignments : Family Browser (UCSC)KRTAP9-7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKRTAP9-7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KRTAP9-7
dbVarKRTAP9-7
ClinVarKRTAP9-7
1000_GenomesKRTAP9-7 
Exome Variant ServerKRTAP9-7
ExAC (Exome Aggregation Consortium)KRTAP9-7 (select the gene name)
Genetic variants : HAPMAP100505724
Genomic Variants (DGV)KRTAP9-7 [DGVbeta]
DECIPHERKRTAP9-7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKRTAP9-7 
Mutations
ICGC Data PortalKRTAP9-7 
TCGA Data PortalKRTAP9-7 
Broad Tumor PortalKRTAP9-7
OASIS PortalKRTAP9-7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKRTAP9-7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKRTAP9-7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KRTAP9-7
DgiDB (Drug Gene Interaction Database)KRTAP9-7
DoCM (Curated mutations)KRTAP9-7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KRTAP9-7 (select a term)
intoGenKRTAP9-7
Cancer3DKRTAP9-7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKRTAP9-7
Genetic Testing Registry KRTAP9-7
NextProtA8MTY7 [Medical]
TSGene100505724
GENETestsKRTAP9-7
Target ValidationKRTAP9-7
Huge Navigator KRTAP9-7 [HugePedia]
snp3D : Map Gene to Disease100505724
BioCentury BCIQKRTAP9-7
ClinGenKRTAP9-7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505724
Chemical/Pharm GKB GenePA38762
Clinical trialKRTAP9-7
Miscellaneous
canSAR (ICR)KRTAP9-7 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKRTAP9-7
EVEXKRTAP9-7
GoPubMedKRTAP9-7
iHOPKRTAP9-7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:26 CEST 2017

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