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KTI12 (KTI12 chromatin associated homolog)

Identity

Alias_namesKTI12 homolog, chromatin associated (S. cerevisiae)
Alias_symbol (synonym)TOT4
MGC20419
SBBI81
Other alias
HGNC (Hugo) KTI12
LocusID (NCBI) 112970
Atlas_Id 65147
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 52032105 and ends at 52033800 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KTI12   25160
Cards
Entrez_Gene (NCBI)KTI12  112970  KTI12 chromatin associated homolog
AliasesSBBI81; TOT4
GeneCards (Weizmann)KTI12
Ensembl hg19 (Hinxton)ENSG00000198841 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198841 [Gene_View]  chr1:52032105-52033800 [Contig_View]  KTI12 [Vega]
ICGC DataPortalENSG00000198841
TCGA cBioPortalKTI12
AceView (NCBI)KTI12
Genatlas (Paris)KTI12
WikiGenes112970
SOURCE (Princeton)KTI12
Genetics Home Reference (NIH)KTI12
Genomic and cartography
GoldenPath hg38 (UCSC)KTI12  -     chr1:52032105-52033800 -  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KTI12  -     1p32.3   [Description]    (hg19-Feb_2009)
EnsemblKTI12 - 1p32.3 [CytoView hg19]  KTI12 - 1p32.3 [CytoView hg38]
Mapping of homologs : NCBIKTI12 [Mapview hg19]  KTI12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF327348 AK313746 BC012173 BI909162 DQ892239
RefSeq transcript (Entrez)NM_138417
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KTI12
Cluster EST : UnigeneHs.476033 [ NCBI ]
CGAP (NCI)Hs.476033
Alternative Splicing GalleryENSG00000198841
Gene ExpressionKTI12 [ NCBI-GEO ]   KTI12 [ EBI - ARRAY_EXPRESS ]   KTI12 [ SEEK ]   KTI12 [ MEM ]
Gene Expression Viewer (FireBrowse)KTI12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112970
GTEX Portal (Tissue expression)KTI12
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EK9
Splice isoforms : SwissVarQ96EK9
PhosPhoSitePlusQ96EK9
Domains : Interpro (EBI)KTI12/PSTK    P-loop_NTPase   
Domain families : Pfam (Sanger)KTI12 (PF08433)   
Domain families : Pfam (NCBI)pfam08433   
Conserved Domain (NCBI)KTI12
DMDM Disease mutations112970
Blocks (Seattle)KTI12
SuperfamilyQ96EK9
Human Protein AtlasENSG00000198841
Peptide AtlasQ96EK9
HPRD14471
IPIIPI00061528   
Protein Interaction databases
DIP (DOE-UCLA)Q96EK9
IntAct (EBI)Q96EK9
FunCoupENSG00000198841
BioGRIDKTI12
STRING (EMBL)KTI12
ZODIACKTI12
Ontologies - Pathways
QuickGOQ96EK9
Ontology : AmiGOprotein binding  ATP binding  
Ontology : EGO-EBIprotein binding  ATP binding  
NDEx NetworkKTI12
Atlas of Cancer Signalling NetworkKTI12
Wikipedia pathwaysKTI12
Orthology - Evolution
OrthoDB112970
GeneTree (enSembl)ENSG00000198841
Phylogenetic Trees/Animal Genes : TreeFamKTI12
HOVERGENQ96EK9
HOGENOMQ96EK9
Homologs : HomoloGeneKTI12
Homology/Alignments : Family Browser (UCSC)KTI12
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKTI12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KTI12
dbVarKTI12
ClinVarKTI12
1000_GenomesKTI12 
Exome Variant ServerKTI12
ExAC (Exome Aggregation Consortium)KTI12 (select the gene name)
Genetic variants : HAPMAP112970
Genomic Variants (DGV)KTI12 [DGVbeta]
DECIPHERKTI12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKTI12 
Mutations
ICGC Data PortalKTI12 
TCGA Data PortalKTI12 
Broad Tumor PortalKTI12
OASIS PortalKTI12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKTI12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKTI12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KTI12
DgiDB (Drug Gene Interaction Database)KTI12
DoCM (Curated mutations)KTI12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KTI12 (select a term)
intoGenKTI12
Cancer3DKTI12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKTI12
Genetic Testing Registry KTI12
NextProtQ96EK9 [Medical]
TSGene112970
GENETestsKTI12
Huge Navigator KTI12 [HugePedia]
snp3D : Map Gene to Disease112970
BioCentury BCIQKTI12
ClinGenKTI12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112970
Chemical/Pharm GKB GenePA142671571
Clinical trialKTI12
Miscellaneous
canSAR (ICR)KTI12 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKTI12
EVEXKTI12
GoPubMedKTI12
iHOPKTI12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:19:00 CEST 2017

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