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KYAT3 (kynurenine aminotransferase 3)

Identity

Alias_namesCCBL2
cysteine conjugate beta lyase 2
Alias_symbol (synonym)RBM1
RP11-82K18.3
KAT3
KATIII
Other alias
HGNC (Hugo) KYAT3
LocusID (NCBI) 56267
Atlas_Id 78366
Location 1p22.2  [Link to chromosome band 1p22]
Location_base_pair Starts at 88935773 and ends at 88992960 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KYAT3   33238
Cards
Entrez_Gene (NCBI)KYAT3  56267  kynurenine aminotransferase 3
AliasesCCBL2; KAT3; KATIII
GeneCards (Weizmann)KYAT3
Ensembl hg19 (Hinxton)ENSG00000137944 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137944 [Gene_View]  chr1:88935773-88992960 [Contig_View]  KYAT3 [Vega]
ICGC DataPortalENSG00000137944
TCGA cBioPortalKYAT3
AceView (NCBI)KYAT3
Genatlas (Paris)KYAT3
WikiGenes56267
SOURCE (Princeton)KYAT3
Genetics Home Reference (NIH)KYAT3
Genomic and cartography
GoldenPath hg38 (UCSC)KYAT3  -     chr1:88935773-88992960 -  1p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KYAT3  -     1p22.2   [Description]    (hg19-Feb_2009)
EnsemblKYAT3 - 1p22.2 [CytoView hg19]  KYAT3 - 1p22.2 [CytoView hg38]
Mapping of homologs : NCBIKYAT3 [Mapview hg19]  KYAT3 [Mapview hg38]
OMIM610656   
Gene and transcription
Genbank (Entrez)AF091090 AI478599 AK057176 AK301326 AK315917
RefSeq transcript (Entrez)NM_001008661 NM_001008662 NM_001349447 NM_001349448 NM_001349449 NM_001349450
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KYAT3
Cluster EST : UnigeneHs.481898 [ NCBI ]
CGAP (NCI)Hs.481898
Alternative Splicing GalleryENSG00000137944
Gene ExpressionKYAT3 [ NCBI-GEO ]   KYAT3 [ EBI - ARRAY_EXPRESS ]   KYAT3 [ SEEK ]   KYAT3 [ MEM ]
Gene Expression Viewer (FireBrowse)KYAT3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56267
GTEX Portal (Tissue expression)KYAT3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6YP21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6YP21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6YP21
Splice isoforms : SwissVarQ6YP21
Catalytic activity : Enzyme2.6.1.7 [ Enzyme-Expasy ]   2.6.1.72.6.1.7 [ IntEnz-EBI ]   2.6.1.7 [ BRENDA ]   2.6.1.7 [ KEGG ]   
PhosPhoSitePlusQ6YP21
Domains : Interpro (EBI)Aminotransferase_I/II    PyrdxlP-dep_Trfase    PyrdxlP-dep_Trfase_major_sub1    PyrdxlP-dep_Trfase_major_sub2   
Domain families : Pfam (Sanger)Aminotran_1_2 (PF00155)   
Domain families : Pfam (NCBI)pfam00155   
Conserved Domain (NCBI)KYAT3
DMDM Disease mutations56267
Blocks (Seattle)KYAT3
SuperfamilyQ6YP21
Human Protein AtlasENSG00000137944
Peptide AtlasQ6YP21
HPRD13752
IPIIPI00465373   IPI00465006   IPI00553183   IPI00647840   
Protein Interaction databases
DIP (DOE-UCLA)Q6YP21
IntAct (EBI)Q6YP21
FunCoupENSG00000137944
BioGRIDKYAT3
STRING (EMBL)KYAT3
ZODIACKYAT3
Ontologies - Pathways
QuickGOQ6YP21
Ontology : AmiGORNA binding  mitochondrion  2-oxoglutarate metabolic process  cellular amino acid metabolic process  biosynthetic process  kynurenine-oxoglutarate transaminase activity  pyridoxal phosphate binding  protein homodimerization activity  kynurenine-glyoxylate transaminase activity  cysteine-S-conjugate beta-lyase activity  kynurenine metabolic process  L-kynurenine metabolic process  
Ontology : EGO-EBIRNA binding  mitochondrion  2-oxoglutarate metabolic process  cellular amino acid metabolic process  biosynthetic process  kynurenine-oxoglutarate transaminase activity  pyridoxal phosphate binding  protein homodimerization activity  kynurenine-glyoxylate transaminase activity  cysteine-S-conjugate beta-lyase activity  kynurenine metabolic process  L-kynurenine metabolic process  
NDEx NetworkKYAT3
Atlas of Cancer Signalling NetworkKYAT3
Wikipedia pathwaysKYAT3
Orthology - Evolution
OrthoDB56267
GeneTree (enSembl)ENSG00000137944
Phylogenetic Trees/Animal Genes : TreeFamKYAT3
HOVERGENQ6YP21
HOGENOMQ6YP21
Homologs : HomoloGeneKYAT3
Homology/Alignments : Family Browser (UCSC)KYAT3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKYAT3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KYAT3
dbVarKYAT3
ClinVarKYAT3
1000_GenomesKYAT3 
Exome Variant ServerKYAT3
ExAC (Exome Aggregation Consortium)KYAT3 (select the gene name)
Genetic variants : HAPMAP56267
Genomic Variants (DGV)KYAT3 [DGVbeta]
DECIPHERKYAT3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKYAT3 
Mutations
ICGC Data PortalKYAT3 
TCGA Data PortalKYAT3 
Broad Tumor PortalKYAT3
OASIS PortalKYAT3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKYAT3
BioMutasearch KYAT3
DgiDB (Drug Gene Interaction Database)KYAT3
DoCM (Curated mutations)KYAT3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KYAT3 (select a term)
intoGenKYAT3
Cancer3DKYAT3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610656   
Orphanet
MedgenKYAT3
Genetic Testing Registry KYAT3
NextProtQ6YP21 [Medical]
TSGene56267
GENETestsKYAT3
Huge Navigator KYAT3 [HugePedia]
snp3D : Map Gene to Disease56267
BioCentury BCIQKYAT3
ClinGenKYAT3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56267
Chemical/Pharm GKB GenePA162381274
Clinical trialKYAT3
Miscellaneous
canSAR (ICR)KYAT3 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKYAT3
EVEXKYAT3
GoPubMedKYAT3
iHOPKYAT3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:19:01 CEST 2017

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