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L3MBTL4 (l(3)mbt-like 4 (Drosophila))

Identity

Other namesHsT1031
HGNC (Hugo) L3MBTL4
LocusID (NCBI) 91133
Location 18p11.31
Location_base_pair Starts at 5954705 and ends at 6414910 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)L3MBTL4   26677
Entrez_Gene (NCBI)L3MBTL4  91133  l(3)mbt-like 4 (Drosophila)
Cards
GeneCards (Weizmann)L3MBTL4
Ensembl (Hinxton)ENSG00000154655 [Gene_View]  chr18:5954705-6414910 [Contig_View]  L3MBTL4 [Vega]
AceView (NCBI)L3MBTL4
Genatlas (Paris)L3MBTL4
SOURCE (Stanford)NM_173464
Genomic and cartography
GoldenPath (UCSC)L3MBTL4  -  18p11.31   chr18:5954705-6414910 -  18p11.31   [Description]    (hg19-Feb_2009)
EnsemblL3MBTL4 - 18p11.31 [CytoView]
Mapping of homologs : NCBIL3MBTL4 [Mapview]
Gene and transcription
Genbank (Entrez)AK026733 AK091075 AK093255 BC039316 CA313345
RefSeq transcript (SRS)NM_173464
RefSeq transcript (Entrez)NM_173464
RefSeq genomic (SRS)AC_000150 NC_000018 NC_018929 NT_010859 NW_001838461 NW_004078094
RefSeq genomic (Entrez)AC_000150 NC_000018 NC_018929 NT_010859 NW_001838461 NW_004078094
Consensus coding sequences : CCDS (NCBI)L3MBTL4
Cluster EST : UnigeneHs.128279 [ SRS ] Hs.128279 [ NCBI ]
CGAP (NCI)Hs.128279
Alternative Splicing : Fast-db (Paris)GSHG0014177
Alternative Splicing GalleryENSG00000154655
Gene ExpressionL3MBTL4 [ NCBI-GEO ]   L3MBTL4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NA19 (SRS) Q8NA19 (Uniprot)
NextProtQ8NA19
With graphics : InterProQ8NA19
Splice isoforms : SwissVarQ8NA19(Swissvar)
Domaine pattern : Prosite (SRS)MBT (PS51079)    SAM_DOMAIN (PS50105)   
Domaine pattern : Prosite (Expaxy)MBT (PS51079)    SAM_DOMAIN (PS50105)   
Domains : Interpro (SRS)Mbt    SAM    SAM/pointed    SAM_type1    Znf_C2HC   
Domains : Interpro (EBI)Mbt    SAM    SAM/pointed    SAM_type1    Znf_C2HC   
Related proteins : CluSTrQ8NA19
Domain families : Pfam (SRS)MBT (PF02820)    SAM_1 (PF00536)    zf-C2HC (PF01530)   
Domain families : Pfam (Sanger)MBT (PF02820)    SAM_1 (PF00536)    zf-C2HC (PF01530)   
Domain families : Pfam (NCBI)pfam02820    pfam00536    pfam01530   
Domain families : Smart (EMBL)MBT (SM00561)  SAM (SM00454)  
DMDM91133
Blocks (Seattle)Q8NA19
Human Protein AtlasENSG00000154655
HPRD08198
IPIIPI00300393   IPI00473138   IPI00789760   
Protein Interaction databases
DIP (DOE-UCLA)Q8NA19
IntAct (EBI)Q8NA19
FunCoupENSG00000154655
REACTOMEL3MBTL4
Protein Interaction Database91133
BioGRIDL3MBTL4
InParanoidQ8NA19
Interologous Interaction database Q8NA19
IntegromeDBL3MBTL4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)L3MBTL4
SNP (GeneSNP Utah)L3MBTL4
SNP : HGBaseL3MBTL4
Genetic variants : HAPMAPL3MBTL4
Somatic Mutations in Cancer : COSMICL3MBTL4 
CONAN: Copy Number AnalysisL3MBTL4 
Mutations and Diseases : HGMDL3MBTL4
OMIM
GENETests
Disease Genetic AssociationL3MBTL4
Huge Navigator L3MBTL4 [HugePedia]  L3MBTL4 [HugeCancerGEM]
Genomic VariantsL3MBTL4  L3MBTL4 [DGVbeta]
snp3D : Map Gene to Disease91133
General knowledge
Homologs : HomoloGeneL3MBTL4
Homology/Alignments : Family Browser (UCSC)L3MBTL4
Phylogenetic Trees/Animal Genes : TreeFamL3MBTL4
Chemical/Protein Interactions : CTD91133
Chemical/Pharm GKB GenePA134935795
Clinical trialL3MBTL4
Cancer Resource (Charite)ENSG00000154655
Ontology : AmiGOsequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-dependent  zinc ion binding  chromatin modification  
Ontology : EGO-EBIsequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-dependent  zinc ion binding  chromatin modification  
Other databases
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
PubGeneL3MBTL4
iHOPL3MBTL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:44:45 CEST 2013
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