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LAIR2 (leukocyte-associated immunoglobulin-like receptor 2)

Identity

Alias_namesleukocyte-associated Ig-like receptor 2
leukocyte-associated immunoglobulin-like receptor 2
Alias_symbol (synonym)CD306
Other alias
HGNC (Hugo) LAIR2
LocusID (NCBI) 3904
Atlas_Id 65161
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 55014013 and ends at 55021900 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LAIR2   6478
Cards
Entrez_Gene (NCBI)LAIR2  3904  leukocyte-associated immunoglobulin-like receptor 2
AliasesCD306
GeneCards (Weizmann)LAIR2
Ensembl hg19 (Hinxton)ENSG00000167618 [Gene_View]  chr19:55014013-55021900 [Contig_View]  LAIR2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167618 [Gene_View]  chr19:55014013-55021900 [Contig_View]  LAIR2 [Vega]
ICGC DataPortalENSG00000167618
TCGA cBioPortalLAIR2
AceView (NCBI)LAIR2
Genatlas (Paris)LAIR2
WikiGenes3904
SOURCE (Princeton)LAIR2
Genetics Home Reference (NIH)LAIR2
Genomic and cartography
GoldenPath hg19 (UCSC)LAIR2  -     chr19:55014013-55021900 +  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LAIR2  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblLAIR2 - 19q13.42 [CytoView hg19]  LAIR2 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILAIR2 [Mapview hg19]  LAIR2 [Mapview hg38]
OMIM602993   
Gene and transcription
Genbank (Entrez)AA133246 AF013250 AI262718 BC057790 BC069366
RefSeq transcript (Entrez)NM_002288 NM_021270
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NT_187693 NW_003571054 NW_003571060 NW_004929415
Consensus coding sequences : CCDS (NCBI)LAIR2
Cluster EST : UnigeneHs.43803 [ NCBI ]
CGAP (NCI)Hs.43803
Alternative Splicing GalleryENSG00000167618
Gene ExpressionLAIR2 [ NCBI-GEO ]   LAIR2 [ EBI - ARRAY_EXPRESS ]   LAIR2 [ SEEK ]   LAIR2 [ MEM ]
Gene Expression Viewer (FireBrowse)LAIR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3904
GTEX Portal (Tissue expression)LAIR2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ISS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ISS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ISS4
Splice isoforms : SwissVarQ6ISS4
PhosPhoSitePlusQ6ISS4
Domains : Interpro (EBI)Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)LAIR2
DMDM Disease mutations3904
Blocks (Seattle)LAIR2
SuperfamilyQ6ISS4
Human Protein AtlasENSG00000167618
Peptide AtlasQ6ISS4
HPRD04293
IPIIPI00032545   IPI00010137   IPI00797172   IPI00789267   IPI00892779   IPI00893204   IPI00892537   IPI00917354   
Protein Interaction databases
DIP (DOE-UCLA)Q6ISS4
IntAct (EBI)Q6ISS4
FunCoupENSG00000167618
BioGRIDLAIR2
STRING (EMBL)LAIR2
ZODIACLAIR2
Ontologies - Pathways
QuickGOQ6ISS4
Ontology : AmiGOprotein binding  extracellular region  
Ontology : EGO-EBIprotein binding  extracellular region  
NDEx NetworkLAIR2
Atlas of Cancer Signalling NetworkLAIR2
Wikipedia pathwaysLAIR2
Orthology - Evolution
OrthoDB3904
GeneTree (enSembl)ENSG00000167618
Phylogenetic Trees/Animal Genes : TreeFamLAIR2
HOVERGENQ6ISS4
HOGENOMQ6ISS4
Homologs : HomoloGeneLAIR2
Homology/Alignments : Family Browser (UCSC)LAIR2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLAIR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LAIR2
dbVarLAIR2
ClinVarLAIR2
1000_GenomesLAIR2 
Exome Variant ServerLAIR2
ExAC (Exome Aggregation Consortium)LAIR2 (select the gene name)
Genetic variants : HAPMAP3904
Genomic Variants (DGV)LAIR2 [DGVbeta]
DECIPHER (Syndromes)19:55014013-55021900  ENSG00000167618
CONAN: Copy Number AnalysisLAIR2 
Mutations
ICGC Data PortalLAIR2 
TCGA Data PortalLAIR2 
Broad Tumor PortalLAIR2
OASIS PortalLAIR2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLAIR2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLAIR2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LAIR2
DgiDB (Drug Gene Interaction Database)LAIR2
DoCM (Curated mutations)LAIR2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LAIR2 (select a term)
intoGenLAIR2
Cancer3DLAIR2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602993   
Orphanet
MedgenLAIR2
Genetic Testing Registry LAIR2
NextProtQ6ISS4 [Medical]
TSGene3904
GENETestsLAIR2
Huge Navigator LAIR2 [HugePedia]
snp3D : Map Gene to Disease3904
BioCentury BCIQLAIR2
ClinGenLAIR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3904
Chemical/Pharm GKB GenePA30267
Clinical trialLAIR2
Miscellaneous
canSAR (ICR)LAIR2 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLAIR2
EVEXLAIR2
GoPubMedLAIR2
iHOPLAIR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:43 CET 2017

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