LAMA3 (laminin, alpha 3)

Identity

Other names	BM600
	E170
	LAMNA
	LOCS
	lama3a
HGNC	LAMA3
Location	18q11.2
Location_base_pair	Starts at 19706982 and ends at 19789027 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LAMA3   6483
Entrez_Gene	LAMA3  3909  laminin, alpha 3
	Cards
GeneCards	LAMA3
Ensembl	LAMA3 [Search_View]   ENSG00000053747 [Gene_View]
Genatlas	LAMA3
GeneLynx	LAMA3
eGenome	LAMA3
euGene	3909
	Genomic and cartography
GoldenPath	LAMA3  -  18q11.2   chr18:19706982-19789027 +  18q11.2   [Description]    (hg18-March_2006)
Ensembl	LAMA3 - 18q11.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LAMA3
	Gene and transcription
Genbank	AA001432 [ ENTREZ ]
Genbank	AB208853 [ ENTREZ ]
Genbank	AF005258 [ ENTREZ ]
Genbank	AK024889 [ ENTREZ ]
Genbank	AK096422 [ ENTREZ ]
RefSeq	NM_000227 [ SRS ]    NM_000227 [ ENTREZ ]
RefSeq	NM_001127717 [ SRS ]    NM_001127717 [ ENTREZ ]
RefSeq	NM_001127718 [ SRS ]    NM_001127718 [ ENTREZ ]
RefSeq	NM_198129 [ SRS ]    NM_198129 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NG_007853 [ SRS ]    NG_007853 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
AceView	LAMA3 AceView - NCBI
Unigene	Hs.436367 [ SRS ]    Hs.436367 [ NCBI ]     HS436367 [ spliceNest ]
Fast-db	2421 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O14637 [ SRS]    O14637 [ EXPASY ]     O14637 [ INTERPRO ]     O14637 [ UNIPROT ]
Prosite	PS00022 EGF_1 [ SRS ]    PS00022 EGF_1 [ Expasy ]
Prosite	PS01248 EGF_LAM_1 [ SRS ]    PS01248 EGF_LAM_1 [ Expasy ]
Prosite	PS50027 EGF_LAM_2 [ SRS ]    PS50027 EGF_LAM_2 [ Expasy ]
Prosite	PS51117 LAMININ_NTER [ SRS ]    PS51117 LAMININ_NTER [ Expasy ]
Interpro	IPR002049 EGF_laminin [ SRS ]    IPR002049 EGF_laminin [ EBI ]
Interpro	IPR013032 EGF_like_reg_CS [ SRS ]    IPR013032 EGF_like_reg_CS [ EBI ]
Interpro	IPR000034 Laminin_B [ SRS ]    IPR000034 Laminin_B [ EBI ]
Interpro	IPR008211 Laminin_N [ SRS ]    IPR008211 Laminin_N [ EBI ]
CluSTr	O14637
Pfam	PF00053 Laminin_EGF [ SRS ]    PF00053 Laminin_EGF [ Sanger ]    pfam00053 [ NCBI-CDD ]
Pfam	PF00055 Laminin_N [ SRS ]    PF00055 Laminin_N [ Sanger ]    pfam00055 [ NCBI-CDD ]
Smart	SM00180 EGF_Lam [EMBL]
Smart	SM00136 LamNT [EMBL]
Prodom	PD003031 Laminin_B[INRA-Toulouse]
Prodom	O14637 O14637_HUMAN [ Domain structure ]   O14637 O14637_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O14637
HPRD	02883
	Protein Interaction databases
DIP	O14637
IntAct	O14637
	Polymorphism : SNP, mutations, diseases
OMIM	226650;226700;245660;600805    [ map ]
GENECLINICS	226650;226700;245660;600805
SNP	LAMA3 [dbSNP-NCBI]
SNP	NM_000227 [SNP-NCI]
SNP	NM_001127717 [SNP-NCI]
SNP	NM_001127718 [SNP-NCI]
SNP	NM_198129 [SNP-NCI]
SNP	LAMA3 [GeneSNPs - Utah]  LAMA3] [HGBASE - SRS]
HAPMAP	LAMA3 [HAPMAP]
COSMIC	LAMA3 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	LAMA3
	General knowledge
Family Browser	LAMA3 [UCSC Family Browser]
SOURCE	NM_000227
SOURCE	NM_001127717
SOURCE	NM_001127718
SOURCE	NM_198129
SMD	Hs.436367
SAGE	Hs.436367
GO	receptor binding [Amigo]  receptor binding
GO	structural molecule activity [Amigo]  structural molecule activity
GO	extracellular region [Amigo]  extracellular region
GO	basement membrane [Amigo]  basement membrane
GO	basement membrane [Amigo]  basement membrane
GO	laminin-1 complex [Amigo]  laminin-1 complex
GO	laminin-5 complex [Amigo]  laminin-5 complex
GO	focal adhesion [Amigo]  focal adhesion
GO	cell adhesion [Amigo]  cell adhesion
GO	cell surface receptor linked signal transduction [Amigo]  cell surface receptor linked signal transduction
GO	epidermis development [Amigo]  epidermis development
GO	regulation of cell adhesion [Amigo]  regulation of cell adhesion
GO	keratinocyte differentiation [Amigo]  keratinocyte differentiation
GO	regulation of cell migration [Amigo]  regulation of cell migration
GO	extracellular matrix [Amigo]  extracellular matrix
GO	regulation of embryonic development [Amigo]  regulation of embryonic development
BIOCARTA	Agrin in Postsynaptic Differentiation    [Genes]
KEGG	Cell Communication
KEGG	Focal adhesion
KEGG	ECM-receptor interaction
PubGene	LAMA3
TreeFam	LAMA3
CTD	3909 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LAMA3 Related clones (RZPD - Berlin)
	PubMed
PubMed	47 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:48:13 2008