Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LARGE1 (LARGE xylosyl- and glucuronyltransferase 1)

Identity

Alias_namesLARGE
like-glycosyltransferase
Alias_symbol (synonym)KIAA0609
Other aliasMDC1D
MDDGA6
MDDGB6
HGNC (Hugo) LARGE1
LocusID (NCBI) 9215
Atlas_Id 55802
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 33669062 and ends at 34316416 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LARGE1   6511
LRG (Locus Reference Genomic)LRG_856
Cards
Entrez_Gene (NCBI)LARGE1  9215  LARGE xylosyl- and glucuronyltransferase 1
AliasesLARGE; MDC1D; MDDGA6; MDDGB6
GeneCards (Weizmann)LARGE1
Ensembl hg19 (Hinxton)ENSG00000133424 [Gene_View]  chr22:33669062-34316416 [Contig_View]  LARGE1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000133424 [Gene_View]  chr22:33669062-34316416 [Contig_View]  LARGE1 [Vega]
ICGC DataPortalENSG00000133424
TCGA cBioPortalLARGE1
AceView (NCBI)LARGE1
Genatlas (Paris)LARGE1
WikiGenes9215
SOURCE (Princeton)LARGE1
Genetics Home Reference (NIH)LARGE1
Genomic and cartography
GoldenPath hg19 (UCSC)LARGE1  -     chr22:33669062-34316416 -  22q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LARGE1  -     22q12.3   [Description]    (hg38-Dec_2013)
EnsemblLARGE1 - 22q12.3 [CytoView hg19]  LARGE1 - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBILARGE1 [Mapview hg19]  LARGE1 [Mapview hg38]
OMIM236670   603590   608840   613154   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_004737 NM_133642
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LARGE1
Cluster EST : UnigeneHs.474667 [ NCBI ]
CGAP (NCI)Hs.474667
Alternative Splicing GalleryENSG00000133424
Gene ExpressionLARGE1 [ NCBI-GEO ]   LARGE1 [ EBI - ARRAY_EXPRESS ]   LARGE1 [ SEEK ]   LARGE1 [ MEM ]
Gene Expression Viewer (FireBrowse)LARGE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)9215
GTEX Portal (Tissue expression)LARGE1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LARGE1
DMDM Disease mutations9215
Blocks (Seattle)LARGE1
Human Protein AtlasENSG00000133424
HPRD04665
IPIIPI00029050   IPI00607752   IPI00880187   IPI00889585   IPI00878770   IPI00878920   IPI00879087   IPI00879892   IPI00879408   IPI01019051   IPI00916356   IPI00916782   
Protein Interaction databases
FunCoupENSG00000133424
BioGRIDLARGE1
STRING (EMBL)LARGE1
ZODIACLARGE1
Ontologies - Pathways
Huge Navigator LARGE1 [HugePedia]
snp3D : Map Gene to Disease9215
BioCentury BCIQLARGE1
ClinGenLARGE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9215
Chemical/Pharm GKB GenePA30296
Clinical trialLARGE1
Miscellaneous
canSAR (ICR)LARGE1 (select the gene name)
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLARGE1
EVEXLARGE1
GoPubMedLARGE1
iHOPLARGE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:12:29 CET 2017

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