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LCOR (ligand dependent nuclear receptor corepressor)

Identity

Alias (NCBI)C10orf12
MLR2
HGNC (Hugo) LCOR
HGNC Alias symbMLR2
FLJ38026
KIAA1795
DKFZP564P1916
FLJ13022
HGNC Previous nameC10orf12
HGNC Previous namechromosome 10 open reading frame 12
LocusID (NCBI) 84458
Atlas_Id 52507
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 96832945 and ends at 96964433 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LCOR (10q24.1) / C10orf131 (10q24.1)LCOR (10q24.1) / CPNE8 (12q12)LCOR (10q24.1) / FAM111A (11q12.1)
LCOR (10q24.1) / LCOR (10q24.1)LCOR (10q24.1) / PNLIPRP3 (10q25.3)MAN1A1 (6q22.31) / LCOR (10q24.1)
LCOR 10q24.1 / C10orf131 10q24.1LCOR 10q24.1 / CPNE8 12q12LCOR 10q24.1 / PNLIPRP3 10q25.3
MAN1A1 6q22.31 / LCOR 10q24.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(10;10)(q24;q24) LCOR/HPSE2


External links

Nomenclature
HGNC (Hugo)LCOR   29503
Cards
Entrez_Gene (NCBI)LCOR    ligand dependent nuclear receptor corepressor
AliasesC10orf12; MLR2
GeneCards (Weizmann)LCOR
Ensembl hg19 (Hinxton)ENSG00000196233 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196233 [Gene_View]  ENSG00000196233 [Sequence]  chr10:96832945-96964433 [Contig_View]  LCOR [Vega]
ICGC DataPortalENSG00000196233
TCGA cBioPortalLCOR
AceView (NCBI)LCOR
Genatlas (Paris)LCOR
SOURCE (Princeton)LCOR
Genetics Home Reference (NIH)LCOR
Genomic and cartography
GoldenPath hg38 (UCSC)LCOR  -     chr10:96832945-96964433 +  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LCOR  -     10q24.1   [Description]    (hg19-Feb_2009)
GoldenPathLCOR - 10q24.1 [CytoView hg19]  LCOR - 10q24.1 [CytoView hg38]
ImmunoBaseENSG00000196233
Genome Data Viewer NCBILCOR [Mapview hg19]  
OMIM607698   
Gene and transcription
Genbank (Entrez)AB058698 AB072899 AI571097 AK023084 AK023248
RefSeq transcript (Entrez)NM_001170765 NM_001170766 NM_001346516 NM_015652 NM_032440
Consensus coding sequences : CCDS (NCBI)LCOR
Gene ExpressionLCOR [ NCBI-GEO ]   LCOR [ EBI - ARRAY_EXPRESS ]   LCOR [ SEEK ]   LCOR [ MEM ]
Gene Expression Viewer (FireBrowse)LCOR [ Firebrowse - Broad ]
GenevisibleExpression of LCOR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84458
GTEX Portal (Tissue expression)LCOR
Human Protein AtlasENSG00000196233-LCOR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LCOR
Human Protein Atlas [tissue]ENSG00000196233-LCOR [tissue]
HPRD07609
Protein Interaction databases
BioGRIDLCOR
STRING (EMBL)LCOR
ZODIACLCOR
Ontologies - Pathways
Litterature
PubMed53 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLCOR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:15:41 CEST 2021

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