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LCTL (lactase like)

Identity

Alias_symbol (synonym)KLPH
FLJ33279
KLG
Other alias
HGNC (Hugo) LCTL
LocusID (NCBI) 197021
Atlas_Id 53662
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 66547468 and ends at 66565979 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LCTL   15583
Cards
Entrez_Gene (NCBI)LCTL  197021  lactase like
AliasesKLG; KLPH
GeneCards (Weizmann)LCTL
Ensembl hg19 (Hinxton)ENSG00000188501 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188501 [Gene_View]  chr15:66547468-66565979 [Contig_View]  LCTL [Vega]
ICGC DataPortalENSG00000188501
TCGA cBioPortalLCTL
AceView (NCBI)LCTL
Genatlas (Paris)LCTL
WikiGenes197021
SOURCE (Princeton)LCTL
Genetics Home Reference (NIH)LCTL
Genomic and cartography
GoldenPath hg38 (UCSC)LCTL  -     chr15:66547468-66565979 -  15q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LCTL  -     15q22.31   [Description]    (hg19-Feb_2009)
EnsemblLCTL - 15q22.31 [CytoView hg19]  LCTL - 15q22.31 [CytoView hg38]
Mapping of homologs : NCBILCTL [Mapview hg19]  LCTL [Mapview hg38]
OMIM617060   
Gene and transcription
Genbank (Entrez)AK090598 AK311441 AY358729 BC148354 BC152990
RefSeq transcript (Entrez)NM_001278562 NM_207338
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LCTL
Cluster EST : UnigeneHs.680983 [ NCBI ]
CGAP (NCI)Hs.680983
Alternative Splicing GalleryENSG00000188501
Gene ExpressionLCTL [ NCBI-GEO ]   LCTL [ EBI - ARRAY_EXPRESS ]   LCTL [ SEEK ]   LCTL [ MEM ]
Gene Expression Viewer (FireBrowse)LCTL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)197021
GTEX Portal (Tissue expression)LCTL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWM7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWM7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWM7
Splice isoforms : SwissVarQ6UWM7
PhosPhoSitePlusQ6UWM7
Domaine pattern : Prosite (Expaxy)GLYCOSYL_HYDROL_F1_1 (PS00572)    GLYCOSYL_HYDROL_F1_2 (PS00653)   
Domains : Interpro (EBI)Glyco_hydro_1    Glyco_hydro_1_AS    Glyco_hydro_1_N_CS    Glyco_hydro_catalytic_dom    Glycoside_hydrolase_SF   
Domain families : Pfam (Sanger)Glyco_hydro_1 (PF00232)   
Domain families : Pfam (NCBI)pfam00232   
Conserved Domain (NCBI)LCTL
DMDM Disease mutations197021
Blocks (Seattle)LCTL
SuperfamilyQ6UWM7
Human Protein AtlasENSG00000188501
Peptide AtlasQ6UWM7
HPRD13930
IPIIPI00410421   IPI01011033   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWM7
IntAct (EBI)Q6UWM7
FunCoupENSG00000188501
BioGRIDLCTL
STRING (EMBL)LCTL
ZODIACLCTL
Ontologies - Pathways
QuickGOQ6UWM7
Ontology : AmiGOendoplasmic reticulum  endoplasmic reticulum membrane  brush border  carbohydrate metabolic process  beta-glucosidase activity  integral component of membrane  glycosyl compound metabolic process  
Ontology : EGO-EBIendoplasmic reticulum  endoplasmic reticulum membrane  brush border  carbohydrate metabolic process  beta-glucosidase activity  integral component of membrane  glycosyl compound metabolic process  
NDEx NetworkLCTL
Atlas of Cancer Signalling NetworkLCTL
Wikipedia pathwaysLCTL
Orthology - Evolution
OrthoDB197021
GeneTree (enSembl)ENSG00000188501
Phylogenetic Trees/Animal Genes : TreeFamLCTL
HOVERGENQ6UWM7
HOGENOMQ6UWM7
Homologs : HomoloGeneLCTL
Homology/Alignments : Family Browser (UCSC)LCTL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLCTL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LCTL
dbVarLCTL
ClinVarLCTL
1000_GenomesLCTL 
Exome Variant ServerLCTL
ExAC (Exome Aggregation Consortium)LCTL (select the gene name)
Genetic variants : HAPMAP197021
Genomic Variants (DGV)LCTL [DGVbeta]
DECIPHERLCTL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLCTL 
Mutations
ICGC Data PortalLCTL 
TCGA Data PortalLCTL 
Broad Tumor PortalLCTL
OASIS PortalLCTL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLCTL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLCTL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LCTL
DgiDB (Drug Gene Interaction Database)LCTL
DoCM (Curated mutations)LCTL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LCTL (select a term)
intoGenLCTL
Cancer3DLCTL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617060   
Orphanet
MedgenLCTL
Genetic Testing Registry LCTL
NextProtQ6UWM7 [Medical]
TSGene197021
GENETestsLCTL
Target ValidationLCTL
Huge Navigator LCTL [HugePedia]
snp3D : Map Gene to Disease197021
BioCentury BCIQLCTL
ClinGenLCTL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD197021
Chemical/Pharm GKB GenePA142671560
Clinical trialLCTL
Miscellaneous
canSAR (ICR)LCTL (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLCTL
EVEXLCTL
GoPubMedLCTL
iHOPLCTL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:05:08 CEST 2017

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