Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LEF1-AS1 (LEF1 antisense RNA 1)

Identity

Alias_namesLEF1 antisense RNA 1 (non-protein coding)
Other aliasLEF1NAT
HGNC (Hugo) LEF1-AS1
LocusID (NCBI) 641518
Atlas_Id 65224
Location 4q25  [Link to chromosome band 4q25]
Location_base_pair Starts at 108172120 and ends at 108176430 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LEF1-AS1   40339
Cards
Entrez_Gene (NCBI)LEF1-AS1  641518  LEF1 antisense RNA 1
AliasesLEF1NAT
GeneCards (Weizmann)LEF1-AS1
Ensembl hg19 (Hinxton)ENSG00000232021 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232021 [Gene_View]  chr4:108172120-108176430 [Contig_View]  LEF1-AS1 [Vega]
ICGC DataPortalENSG00000232021
TCGA cBioPortalLEF1-AS1
AceView (NCBI)LEF1-AS1
Genatlas (Paris)LEF1-AS1
WikiGenes641518
SOURCE (Princeton)LEF1-AS1
Genetics Home Reference (NIH)LEF1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)LEF1-AS1  -     chr4:108172120-108176430 +  4q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LEF1-AS1  -     4q25   [Description]    (hg19-Feb_2009)
EnsemblLEF1-AS1 - 4q25 [CytoView hg19]  LEF1-AS1 - 4q25 [CytoView hg38]
Mapping of homologs : NCBILEF1-AS1 [Mapview hg19]  LEF1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC020624 BC041819 BC067877 BC094788
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LEF1-AS1
Cluster EST : UnigeneHs.535760 [ NCBI ]
CGAP (NCI)Hs.535760
Alternative Splicing GalleryENSG00000232021
Gene ExpressionLEF1-AS1 [ NCBI-GEO ]   LEF1-AS1 [ EBI - ARRAY_EXPRESS ]   LEF1-AS1 [ SEEK ]   LEF1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)LEF1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)641518
GTEX Portal (Tissue expression)LEF1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LEF1-AS1
DMDM Disease mutations641518
Blocks (Seattle)LEF1-AS1
Human Protein AtlasENSG00000232021
IPIIPI00880206   IPI00883988   
Protein Interaction databases
FunCoupENSG00000232021
BioGRIDLEF1-AS1
STRING (EMBL)LEF1-AS1
ZODIACLEF1-AS1
Ontologies - Pathways
Huge Navigator LEF1-AS1 [HugePedia]
snp3D : Map Gene to Disease641518
BioCentury BCIQLEF1-AS1
ClinGenLEF1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641518
Clinical trialLEF1-AS1
Miscellaneous
canSAR (ICR)LEF1-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLEF1-AS1
EVEXLEF1-AS1
GoPubMedLEF1-AS1
iHOPLEF1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:55:44 CEST 2017

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