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LENG1 (leukocyte receptor cluster member 1)

Identity

Alias_namesleukocyte receptor cluster (LRC) member 1
Other alias-
HGNC (Hugo) LENG1
LocusID (NCBI) 79165
Atlas_Id 65229
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54155641 and ends at 54159743 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LENG1   15502
Cards
Entrez_Gene (NCBI)LENG1  79165  leukocyte receptor cluster member 1
Aliases
GeneCards (Weizmann)LENG1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:54155641-54159743 [Contig_View]  LENG1 [Vega]
TCGA cBioPortalLENG1
AceView (NCBI)LENG1
Genatlas (Paris)LENG1
WikiGenes79165
SOURCE (Princeton)LENG1
Genetics Home Reference (NIH)LENG1
Genomic and cartography
GoldenPath hg38 (UCSC)LENG1  -     chr19:54155641-54159743 -  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LENG1  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblLENG1 - 19q13.42 [CytoView hg19]  LENG1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILENG1 [Mapview hg19]  LENG1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF211966 BC014986 BP870984 DQ892220 DQ895417
RefSeq transcript (Entrez)NM_024316
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571055 NW_003571056 NW_003571057 NW_003571058 NW_003571059 NW_003571060 NW_003571061
Consensus coding sequences : CCDS (NCBI)LENG1
Cluster EST : UnigeneHs.590974 [ NCBI ]
CGAP (NCI)Hs.590974
Gene ExpressionLENG1 [ NCBI-GEO ]   LENG1 [ EBI - ARRAY_EXPRESS ]   LENG1 [ SEEK ]   LENG1 [ MEM ]
Gene Expression Viewer (FireBrowse)LENG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79165
GTEX Portal (Tissue expression)LENG1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BZ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BZ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BZ8
Splice isoforms : SwissVarQ96BZ8
PhosPhoSitePlusQ96BZ8
Domains : Interpro (EBI)CIR_N_dom   
Domain families : Pfam (Sanger)Cir_N (PF10197)   
Domain families : Pfam (NCBI)pfam10197   
Domain families : Smart (EMBL)Cir_N (SM01083)  
Conserved Domain (NCBI)LENG1
DMDM Disease mutations79165
Blocks (Seattle)LENG1
SuperfamilyQ96BZ8
Peptide AtlasQ96BZ8
HPRD13985
IPIIPI00100947   
Protein Interaction databases
DIP (DOE-UCLA)Q96BZ8
IntAct (EBI)Q96BZ8
BioGRIDLENG1
STRING (EMBL)LENG1
ZODIACLENG1
Ontologies - Pathways
QuickGOQ96BZ8
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkLENG1
Atlas of Cancer Signalling NetworkLENG1
Wikipedia pathwaysLENG1
Orthology - Evolution
OrthoDB79165
Phylogenetic Trees/Animal Genes : TreeFamLENG1
HOVERGENQ96BZ8
HOGENOMQ96BZ8
Homologs : HomoloGeneLENG1
Homology/Alignments : Family Browser (UCSC)LENG1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLENG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LENG1
dbVarLENG1
ClinVarLENG1
1000_GenomesLENG1 
Exome Variant ServerLENG1
ExAC (Exome Aggregation Consortium)LENG1 (select the gene name)
Genetic variants : HAPMAP79165
Genomic Variants (DGV)LENG1 [DGVbeta]
DECIPHERLENG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLENG1 
Mutations
ICGC Data PortalLENG1 
TCGA Data PortalLENG1 
Broad Tumor PortalLENG1
OASIS PortalLENG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLENG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLENG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LENG1
DgiDB (Drug Gene Interaction Database)LENG1
DoCM (Curated mutations)LENG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LENG1 (select a term)
intoGenLENG1
Cancer3DLENG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLENG1
Genetic Testing Registry LENG1
NextProtQ96BZ8 [Medical]
TSGene79165
GENETestsLENG1
Target ValidationLENG1
Huge Navigator LENG1 [HugePedia]
snp3D : Map Gene to Disease79165
BioCentury BCIQLENG1
ClinGenLENG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79165
Chemical/Pharm GKB GenePA134904804
Clinical trialLENG1
Miscellaneous
canSAR (ICR)LENG1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLENG1
EVEXLENG1
GoPubMedLENG1
iHOPLENG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:38 CEST 2017

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