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LENG8 (leukocyte receptor cluster member 8)

Identity

Alias_namesleukocyte receptor cluster (LRC) member 8
Alias_symbol (synonym)KIAA1932
MGC40108
pp13842
Other alias
HGNC (Hugo) LENG8
LocusID (NCBI) 114823
Atlas_Id 65230
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54449162 and ends at 54462046 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACTB (7p22.1) / LENG8 (19q13.42)BCL2L12 (19q13.33) / LENG8 (19q13.42)LENG8 (19q13.42) / LENG8 (19q13.42)
LENG8 (19q13.42) / NDUFA8 (9q33.2)LENG8 (19q13.42) / PNPO (17q21.32)LENG8 (19q13.42) / RTF1 (15q15.1)
SNRPN (15q11.2) / LENG8 (19q13.42)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LENG8   15500
Cards
Entrez_Gene (NCBI)LENG8  114823  leukocyte receptor cluster member 8
Aliasespp13842
GeneCards (Weizmann)LENG8
Ensembl hg19 (Hinxton)ENSG00000167615 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167615 [Gene_View]  chr19:54449162-54462046 [Contig_View]  LENG8 [Vega]
ICGC DataPortalENSG00000167615
TCGA cBioPortalLENG8
AceView (NCBI)LENG8
Genatlas (Paris)LENG8
WikiGenes114823
SOURCE (Princeton)LENG8
Genetics Home Reference (NIH)LENG8
Genomic and cartography
GoldenPath hg38 (UCSC)LENG8  -     chr19:54449162-54462046 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LENG8  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblLENG8 - 19q13.42 [CytoView hg19]  LENG8 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILENG8 [Mapview hg19]  LENG8 [Mapview hg38]
OMIM616575   
Gene and transcription
Genbank (Entrez)AB067519 AF211973 AF211974 AF211975 AF318338
RefSeq transcript (Entrez)NM_052925
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571060
Consensus coding sequences : CCDS (NCBI)LENG8
Cluster EST : UnigeneHs.744596 [ NCBI ]
CGAP (NCI)Hs.744596
Alternative Splicing GalleryENSG00000167615
Gene ExpressionLENG8 [ NCBI-GEO ]   LENG8 [ EBI - ARRAY_EXPRESS ]   LENG8 [ SEEK ]   LENG8 [ MEM ]
Gene Expression Viewer (FireBrowse)LENG8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114823
GTEX Portal (Tissue expression)LENG8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PV6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PV6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PV6
Splice isoforms : SwissVarQ96PV6
PhosPhoSitePlusQ96PV6
Domains : Interpro (EBI)SAC3/GANP/THP3   
Domain families : Pfam (Sanger)SAC3_GANP (PF03399)   
Domain families : Pfam (NCBI)pfam03399   
Conserved Domain (NCBI)LENG8
DMDM Disease mutations114823
Blocks (Seattle)LENG8
SuperfamilyQ96PV6
Human Protein AtlasENSG00000167615
Peptide AtlasQ96PV6
HPRD11226
IPIIPI00217858   IPI00386039   IPI00952907   IPI00552622   IPI00658190   IPI00894500   IPI00177888   IPI00852904   IPI00924941   IPI00925123   IPI00926974   
Protein Interaction databases
DIP (DOE-UCLA)Q96PV6
IntAct (EBI)Q96PV6
FunCoupENSG00000167615
BioGRIDLENG8
STRING (EMBL)LENG8
ZODIACLENG8
Ontologies - Pathways
QuickGOQ96PV6
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkLENG8
Atlas of Cancer Signalling NetworkLENG8
Wikipedia pathwaysLENG8
Orthology - Evolution
OrthoDB114823
GeneTree (enSembl)ENSG00000167615
Phylogenetic Trees/Animal Genes : TreeFamLENG8
HOVERGENQ96PV6
HOGENOMQ96PV6
Homologs : HomoloGeneLENG8
Homology/Alignments : Family Browser (UCSC)LENG8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLENG8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LENG8
dbVarLENG8
ClinVarLENG8
1000_GenomesLENG8 
Exome Variant ServerLENG8
ExAC (Exome Aggregation Consortium)LENG8 (select the gene name)
Genetic variants : HAPMAP114823
Genomic Variants (DGV)LENG8 [DGVbeta]
DECIPHERLENG8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLENG8 
Mutations
ICGC Data PortalLENG8 
TCGA Data PortalLENG8 
Broad Tumor PortalLENG8
OASIS PortalLENG8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLENG8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLENG8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LENG8
DgiDB (Drug Gene Interaction Database)LENG8
DoCM (Curated mutations)LENG8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LENG8 (select a term)
intoGenLENG8
Cancer3DLENG8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616575   
Orphanet
MedgenLENG8
Genetic Testing Registry LENG8
NextProtQ96PV6 [Medical]
TSGene114823
GENETestsLENG8
Target ValidationLENG8
Huge Navigator LENG8 [HugePedia]
snp3D : Map Gene to Disease114823
BioCentury BCIQLENG8
ClinGenLENG8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114823
Chemical/Pharm GKB GenePA134903953
Clinical trialLENG8
Miscellaneous
canSAR (ICR)LENG8 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLENG8
EVEXLENG8
GoPubMedLENG8
iHOPLENG8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:55:45 CEST 2017

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