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LENG9 (leukocyte receptor cluster member 9)

Identity

Alias_namesleukocyte receptor cluster (LRC) member 9
Other alias-
HGNC (Hugo) LENG9
LocusID (NCBI) 94059
Atlas_Id 65231
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54461796 and ends at 54463711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LENG9   16306
Cards
Entrez_Gene (NCBI)LENG9  94059  leukocyte receptor cluster member 9
Aliases
GeneCards (Weizmann)LENG9
Ensembl hg19 (Hinxton)ENSG00000275183 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275183 [Gene_View]  chr19:54461796-54463711 [Contig_View]  LENG9 [Vega]
ICGC DataPortalENSG00000275183
TCGA cBioPortalLENG9
AceView (NCBI)LENG9
Genatlas (Paris)LENG9
WikiGenes94059
SOURCE (Princeton)LENG9
Genetics Home Reference (NIH)LENG9
Genomic and cartography
GoldenPath hg38 (UCSC)LENG9  -     chr19:54461796-54463711 -  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LENG9  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblLENG9 - 19q13.42 [CytoView hg19]  LENG9 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILENG9 [Mapview hg19]  LENG9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF211976 BC015921 CA450132
RefSeq transcript (Entrez)NM_001301782 NM_198988
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571060
Consensus coding sequences : CCDS (NCBI)LENG9
Cluster EST : UnigeneHs.590976 [ NCBI ]
CGAP (NCI)Hs.590976
Alternative Splicing GalleryENSG00000275183
Gene ExpressionLENG9 [ NCBI-GEO ]   LENG9 [ EBI - ARRAY_EXPRESS ]   LENG9 [ SEEK ]   LENG9 [ MEM ]
Gene Expression Viewer (FireBrowse)LENG9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)94059
GTEX Portal (Tissue expression)LENG9
Human Protein AtlasENSG00000275183-LENG9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96B70   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96B70  Sequ%ncg]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96B70
Splice isoforms : SwissVarQ96B70
PhosPhoSitePlusQ96B70
Domaine pattern : Prosite (Expaxy)ZF_C3H1 (PS50103)   
Domains : Interpro (EBI)cNuc_Pdiesterase    Kinase-A_anchor_nucl_local_sig    UPF0248    Znf_CCCH   
Domain families : Pfam (Sanger)AKAP7_NLS (PF10469)    DUF504 (PF04457)   
Domain families : Pfam (NCBI)pfam10469    pfam04457   
Domain families : Smart (EMBL)ZnF_C3H1 (SM00356)  
Conserved Domain (NCBI)LENG9
DMDM Disease mutations94059
Blocks (Seattle)LENG9
SuperfamilyQ96B70
Human Protein Atlas [tissue]ENSG00000275183-LENG9 [tissue]
Peptide AtlasQ96B70
HPRD13986
IPIIPI00939950   IPI00893138   
Protein Interaction databases
DIP (DOE-UCLA)Q96B70
IntAct (EBI)Q96B70
FunCoupENSG00000275183
BioGRIDLENG9
STRING (EMBL)LENG9
ZODIACLENG9
Ontologies - Pathways
QuickGOQ96B70
Ontology : AmiGOmetal ion binding  
Ontology : EGO-EBImetal ion binding  
NDEx NetworkLENG9
Atlas of Cancer Signalling NetworkLENG9
Wikipedia pathwaysLENG9
Orthology - Evolution
OrthoDB94059
GeneTree (enSembl)ENSG00000275183
Phylogenetic Trees/Animal Genes : TreeFamLENG9
HOVERGENQ96B70
HOGENOMQ96B70
Homologs : HomoloGeneLENG9
Homology/Alignments : Family Browser (UCSC)LENG9
Gene fusions - Rearrangements
Fusion: Tumor Portal LENG9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLENG9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LENG9
dbVarLENG9
ClinVarLENG9
1000_GenomesLENG9 
Exome Variant ServerLENG9
ExAC (Exome Aggregation Consortium)ENSG00000275183
GNOMAD BrowserENSG00000275183
Genetic variants : HAPMAP94059
Genomic Variants (DGV)LENG9 [DGVbeta]
DECIPHERLENG9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLENG9 
Mutations
ICGC Data PortalLENG9 
TCGA Data PortalLENG9 
Broad Tumor PortalLENG9
OASIS PortalLENG9 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDLENG9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LENG9
DgiDB (Drug Gene Interaction Database)LENG9
DoCM (Curated mutations)LENG9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LENG9 (select a term)
intoGenLENG9
Cancer3DLENG9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLENG9
Genetic Testing Registry LENG9
NextProtQ96B70 [Medical]
TSGene94059
GENETestsLENG9
Target ValidationLENG9
Huge Navigator LENG9 [HugePedia]
snp3D : Map Gene to Disease94059
BioCentury BCIQLENG9
ClinGenLENG9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94059
Chemical/Pharm GKB GenePA134975056
Clinical trialLENG9
Miscellaneous
canSAR (ICR)LENG9 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLENG9
EVEXLENG9
GoPubMedLENG9
iHOPLENG9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:53:33 CET 2017

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