| Nomenclature | | HGNC (Hugo) | LEPREL1 19317 |
| Entrez_Gene (NCBI) | LEPREL1 55214 leprecan-like 1 |
| Cards |
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| GeneCards (Weizmann) | LEPREL1 |
| Ensembl (Hinxton) | ENSG00000090530 [Gene_View] LEPREL1 [Vega] |
| AceView (NCBI) | LEPREL1 |
| Genatlas (Paris) | LEPREL1 |
| euGene (Indiana) | 55214 |
| SOURCE (Stanford) | NM_001134418 NM_018192
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| Genomic and cartography |
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| GoldenPath (UCSC) | LEPREL1 - 3q29 chr3:191157212-191322920 - 3q28 [Description] (hg18-March_2006) |
| Ensembl | LEPREL1 - 3q28 [CytoView] |
| Mapping of homologs : NCBI | LEPREL1 [Mapview] |
| OMIM | 610341 |
| Gene and transcription |
| Gene : Genbank (Entrez) | AJ430351 AK001580 AK056447 AK125134 BC005029 |
| Reference sequence (RefSeq transcript) :SRS | NM_001134418 NM_018192 |
| Reference transcript : Entrez | NM_001134418 NM_018192 |
| RefSeq genomic : SRS | AC_000046 AC_000135 NC_000003 NT_005612 NW_001838884 NW_921807 |
| RefSeq genomic : Entrez | AC_000046 AC_000135 NC_000003 NT_005612 NW_001838884 NW_921807 |
| Consensus coding sequences : CCDS NCBI | LEPREL1 |
| Cluster EST : Unigene | Hs.374191 [ SRS ] Hs.374191 [ NCBI ] |
| Alternative Splicing : Fast-db (Paris) | 15525 |
| Protein : pattern, domain, 3D structure |
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| Protein : UniProt/SwissProt | Q8IVL5 (SRS) Q8IVL5 (Expasy) Q8IVL5 (Uniprot) |
| With graphics : InterPro | Q8IVL5 |
| Splice isoforms : VarSplice FASTA | Q8IVL5(VarSplice FASTA) |
| Domaine pattern : Prosite (SRS) | ER_TARGET (PS00014) TPR (PS50005) TPR_REGION (PS50293) |
| Domain pattern : Prosite (Expaxy) | ER_TARGET (PS00014) TPR (PS50005) TPR_REGION (PS50293) |
| Domains : Interpro (SRS) | 2OG-FeII_Oase ER_targeting_sequence Pro_4_hyd_alph TPR_2 TPR_region |
| Domains : Interpro (EBI) | 2OG-FeII_Oase ER_targeting_sequence Pro_4_hyd_alph TPR_2 TPR_region |
| Related proteins : CluSTr | Q8IVL5 |
| Domain families : Pfam SRS | 2OG-FeII_Oxy (PF03171) TPR_2 (PF07719) |
| Domain families : Pfam Sanger | 2OG-FeII_Oxy (PF03171) TPR_2 (PF07719) |
| Domain families : Pfam NCBI | pfam03171 pfam07719 |
| Domain families : Smart EMBL | P4Hc (SM00702) |
| Blocks (Seattle) | Q8IVL5 |
| Crystal structure of protein : PDB SRS | |
| Crystal structure of protein : PDBSum | |
| Crystal structure of protein : IMB | |
| Crystal structure of protein : PDB RSDB | |
| HPRD | 17270 |
| Protein Interaction databases |
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| DIP (DOE-UCLA) | Q8IVL5 |
| IntAct (EBI) | Q8IVL5 |
| Polymorphism : SNP, mutations, diseases |
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| Single Nucleotide Polymorphism (SNP) : dbSNP NCBI | LEPREL1 |
| SNP : GeneSNP Utah | LEPREL1 |
| SNP : HGBase | LEPREL1 |
| Genetic variants : HAPMAP | LEPREL1 |
| Mutations and Diseases : HGMD | LEPREL1 |
| Hereditary diseases : OMIM | 610341 |
| Hereditary diseases : GENETests | 610341 |
| Diseases : Genetic Association | LEPREL1 |
| General knowledge |
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| Homologs : HomoloGene | LEPREL1 |
| Homology/Alignments : Family Browser UCSC | LEPREL1 |
| Phylogenetic Trees/Animal Genes : TreeFam | LEPREL1 |
| Catalytic activity : Enzyme | 1.14.11.7 [ Enzyme-Expasy ] 1.14.11.7 [ Enzyme-SRS ] 1.14.11.7 [ IntEnz-EBI ] 1.14.11.7 [ BRENDA ] 1.14.11.7 [ KEGG ] |
| Chemical/Protein Interactions : CTD | 55214 |
| Keywords Ontology : AmiGO | iron ion binding endoplasmic reticulum Golgi apparatus oxidoreductase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors protein metabolic process procollagen-proline 3-dioxygenase activity L-ascorbic acid binding metal ion binding oxidation reduction |
| Keywords Ontology : EGO-EBI | iron ion binding endoplasmic reticulum Golgi apparatus oxidoreductase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors protein metabolic process procollagen-proline 3-dioxygenase activity L-ascorbic acid binding metal ion binding oxidation reduction |
| Pathways : BIOCARTA | |
| Pathways : KEGG | |
| Other databases |
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| Probes |
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| Probes : Imagenes | LEPREL1 Related clones (RZPD - Berlin) |
| Literature |
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| PubMed | 10 Pubmed reference(s) in Entrez |
| PubGene | LEPREL1 |
