Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LGALS14 (galectin 14)

Identity

Alias_nameslectin
Alias_symbol (synonym)PPL13
CLC2
Other alias
HGNC (Hugo) LGALS14
LocusID (NCBI) 56891
Atlas_Id 54006
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 39704306 and ends at 39709448 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LGALS14   30054
Cards
Entrez_Gene (NCBI)LGALS14  56891  galectin 14
AliasesCLC2; PPL13
GeneCards (Weizmann)LGALS14
Ensembl hg19 (Hinxton)ENSG00000006659 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000006659 [Gene_View]  chr19:39704306-39709448 [Contig_View]  LGALS14 [Vega]
ICGC DataPortalENSG00000006659
TCGA cBioPortalLGALS14
AceView (NCBI)LGALS14
Genatlas (Paris)LGALS14
WikiGenes56891
SOURCE (Princeton)LGALS14
Genetics Home Reference (NIH)LGALS14
Genomic and cartography
GoldenPath hg38 (UCSC)LGALS14  -     chr19:39704306-39709448 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LGALS14  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblLGALS14 - 19q13.2 [CytoView hg19]  LGALS14 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBILGALS14 [Mapview hg19]  LGALS14 [Mapview hg38]
OMIM607260   
Gene and transcription
Genbank (Entrez)AF123762 AF267852 AF367430 AF367431 AF367432
RefSeq transcript (Entrez)NM_020129 NM_203471
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LGALS14
Cluster EST : UnigeneHs.24236 [ NCBI ]
CGAP (NCI)Hs.24236
Alternative Splicing GalleryENSG00000006659
Gene ExpressionLGALS14 [ NCBI-GEO ]   LGALS14 [ EBI - ARRAY_EXPRESS ]   LGALS14 [ SEEK ]   LGALS14 [ MEM ]
Gene Expression Viewer (FireBrowse)LGALS14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56891
GTEX Portal (Tissue expression)LGALS14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TCE9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TCE9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TCE9
Splice isoforms : SwissVarQ8TCE9
PhosPhoSitePlusQ8TCE9
Domaine pattern : Prosite (Expaxy)GALECTIN (PS51304)   
Domains : Interpro (EBI)ConA-like_dom    Galectin_14    Galectin_CRD   
Domain families : Pfam (Sanger)Gal-bind_lectin (PF00337)   
Domain families : Pfam (NCBI)pfam00337   
Domain families : Smart (EMBL)Gal-bind_lectin (SM00908)  GLECT (SM00276)  
Conserved Domain (NCBI)LGALS14
DMDM Disease mutations56891
Blocks (Seattle)LGALS14
SuperfamilyQ8TCE9
Human Protein AtlasENSG00000006659
Peptide AtlasQ8TCE9
HPRD06268
IPIIPI00397422   IPI00409610   
Protein Interaction databases
DIP (DOE-UCLA)Q8TCE9
IntAct (EBI)Q8TCE9
FunCoupENSG00000006659
BioGRIDLGALS14
STRING (EMBL)LGALS14
ZODIACLGALS14
Ontologies - Pathways
QuickGOQ8TCE9
Ontology : AmiGOprotein binding  nucleus  apoptotic process  carbohydrate binding  positive regulation of T cell apoptotic process  
Ontology : EGO-EBIprotein binding  nucleus  apoptotic process  carbohydrate binding  positive regulation of T cell apoptotic process  
NDEx NetworkLGALS14
Atlas of Cancer Signalling NetworkLGALS14
Wikipedia pathwaysLGALS14
Orthology - Evolution
OrthoDB56891
GeneTree (enSembl)ENSG00000006659
Phylogenetic Trees/Animal Genes : TreeFamLGALS14
HOVERGENQ8TCE9
HOGENOMQ8TCE9
Homologs : HomoloGeneLGALS14
Homology/Alignments : Family Browser (UCSC)LGALS14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLGALS14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LGALS14
dbVarLGALS14
ClinVarLGALS14
1000_GenomesLGALS14 
Exome Variant ServerLGALS14
ExAC (Exome Aggregation Consortium)LGALS14 (select the gene name)
Genetic variants : HAPMAP56891
Genomic Variants (DGV)LGALS14 [DGVbeta]
DECIPHERLGALS14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLGALS14 
Mutations
ICGC Data PortalLGALS14 
TCGA Data PortalLGALS14 
Broad Tumor PortalLGALS14
OASIS PortalLGALS14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLGALS14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLGALS14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LGALS14
DgiDB (Drug Gene Interaction Database)LGALS14
DoCM (Curated mutations)LGALS14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LGALS14 (select a term)
intoGenLGALS14
Cancer3DLGALS14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607260   
Orphanet
MedgenLGALS14
Genetic Testing Registry LGALS14
NextProtQ8TCE9 [Medical]
TSGene56891
GENETestsLGALS14
Target ValidationLGALS14
Huge Navigator LGALS14 [HugePedia]
snp3D : Map Gene to Disease56891
BioCentury BCIQLGALS14
ClinGenLGALS14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56891
Chemical/Pharm GKB GenePA134882378
Clinical trialLGALS14
Miscellaneous
canSAR (ICR)LGALS14 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLGALS14
EVEXLGALS14
GoPubMedLGALS14
iHOPLGALS14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:40:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.