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LGALS17A (Charcot-Leyden crystal protein pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 400696
Atlas_Id 65239
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 40170014 and ends at 40177008 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LGALS17A  400696  Charcot-Leyden crystal protein pseudogene
Aliases
GeneCards (Weizmann)LGALS17A
Ensembl hg19 (Hinxton)ENSG00000226025 [Gene_View]  chr19:40170014-40177008 [Contig_View]  LGALS17A [Vega]
Ensembl hg38 (Hinxton)ENSG00000226025 [Gene_View]  chr19:40170014-40177008 [Contig_View]  LGALS17A [Vega]
ICGC DataPortalENSG00000226025
TCGA cBioPortalLGALS17A
AceView (NCBI)LGALS17A
Genatlas (Paris)LGALS17A
WikiGenes400696
SOURCE (Princeton)LGALS17A
Genetics Home Reference (NIH)LGALS17A
Genomic and cartography
GoldenPath hg19 (UCSC)LGALS17A  -     chr19:40170014-40177008 +  19q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LGALS17A  -     19q13.2   [Description]    (hg38-Dec_2013)
EnsemblLGALS17A - 19q13.2 [CytoView hg19]  LGALS17A - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBILGALS17A [Mapview hg19]  LGALS17A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123499 BC118595 BC122559 BC128606 FJ613353
RefSeq transcript (Entrez)NM_207646
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)LGALS17A
Cluster EST : UnigeneHs.456377 [ NCBI ]
CGAP (NCI)Hs.456377
Alternative Splicing GalleryENSG00000226025
Gene ExpressionLGALS17A [ NCBI-GEO ]   LGALS17A [ EBI - ARRAY_EXPRESS ]   LGALS17A [ SEEK ]   LGALS17A [ MEM ]
Gene Expression Viewer (FireBrowse)LGALS17A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400696
GTEX Portal (Tissue expression)LGALS17A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LGALS17A
DMDM Disease mutations400696
Blocks (Seattle)LGALS17A
Human Protein AtlasENSG00000226025
HPRD14221
IPIIPI00783854   IPI00410596   IPI00979528   
Protein Interaction databases
FunCoupENSG00000226025
BioGRIDLGALS17A
STRING (EMBL)LGALS17A
ZODIACLGALS17A
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease400696
BioCentury BCIQLGALS17A
ClinGenLGALS17A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400696
Clinical trialLGALS17A
Miscellaneous
canSAR (ICR)LGALS17A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLGALS17A
EVEXLGALS17A
GoPubMedLGALS17A
iHOPLGALS17A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:10:59 CET 2017

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