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LGALS7B (lectin, galactoside-binding, soluble, 7B)

Identity

Other namesGAL7
Gal-7
HKL-14
LGALS7
PI7
HGNC (Hugo) LGALS7B
LocusID (NCBI) 653499
Location 19q13.2
Location_base_pair Starts at 39279850 and ends at 39282394 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LGALS7B   34447
Entrez_Gene (NCBI)LGALS7B  653499  lectin, galactoside-binding, soluble, 7B
Cards
GeneCards (Weizmann)LGALS7B
Ensembl (Hinxton)ENSG00000178934 [Gene_View]  chr19:39279850-39282394 [Contig_View]  LGALS7B [Vega]
AceView (NCBI)LGALS7B
Genatlas (Paris)LGALS7B
SOURCE (Stanford)NM_001042507
Genomic and cartography
GoldenPath (UCSC)LGALS7B  -  19q13.2   chr19:39279850-39282394 +  19q13.2   [Description]    (hg19-Feb_2009)
EnsemblLGALS7B - 19q13.2 [CytoView]
Mapping of homologs : NCBILGALS7B [Mapview]
Gene and transcription
Genbank (Entrez)AW015224 BC042911 BC061588 BC073743 L07769
RefSeq transcript (SRS)NM_001042507
RefSeq transcript (Entrez)NM_001042507
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838496 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838496 NW_004078099
Consensus coding sequences : CCDS (NCBI)LGALS7B
Cluster EST : UnigeneHs.558355 [ SRS ] Hs.558355 [ NCBI ]
CGAP (NCI)Hs.558355
Alternative Splicing : Fast-db (Paris)GSHG0015795
Alternative Splicing GalleryENSG00000178934
Gene ExpressionLGALS7B [ NCBI-GEO ]   LGALS7B [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP47929 (SRS) P47929 (Uniprot)
NextProtP47929
With graphics : InterProP47929
Splice isoforms : SwissVarP47929(Swissvar)
Domaine pattern : Prosite (SRS)GALECTIN (PS51304)   
Domaine pattern : Prosite (Expaxy)GALECTIN (PS51304)   
Domains : Interpro (SRS)ConA-like_lec_gl_sf    ConA-like_subgrp    Galectin_CRD   
Domains : Interpro (EBI)ConA-like_lec_gl_sf    ConA-like_subgrp    Galectin_CRD   
Related proteins : CluSTrP47929
Domain families : Pfam (SRS)Gal-bind_lectin (PF00337)   
Domain families : Pfam (Sanger)Gal-bind_lectin (PF00337)   
Domain families : Pfam (NCBI)pfam00337   
Domain families : Smart (EMBL)Gal-bind_lectin (SM00908)  GLECT (SM00276)  
DMDM653499
Blocks (Seattle)P47929
PDB (SRS)1BKZ    2GAL    3GAL    3ZXE    3ZXF    4GAL    5GAL   
PDB (PDBSum)1BKZ    2GAL    3GAL    3ZXE    3ZXF    4GAL    5GAL   
PDB (IMB)1BKZ    2GAL    3GAL    3ZXE    3ZXF    4GAL    5GAL   
PDB (RSDB)1BKZ    2GAL    3GAL    3ZXE    3ZXF    4GAL    5GAL   
Human Protein AtlasENSG00000178934
Protein Interaction databases
DIP (DOE-UCLA)P47929
IntAct (EBI)P47929
FunCoupENSG00000178934
REACTOMELGALS7B
Protein Interaction Database653499
BioGRIDLGALS7B
InParanoidP47929
Interologous Interaction database P47929
IntegromeDBLGALS7B
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)LGALS7B
SNP (GeneSNP Utah)LGALS7B
SNP : HGBaseLGALS7B
Genetic variants : HAPMAPLGALS7B
Mutations and Diseases : HGMDLGALS7B
OMIM
GENETests
Disease Genetic AssociationLGALS7B
Huge Navigator LGALS7B [HugePedia]  LGALS7B [HugeCancerGEM]
Genomic VariantsLGALS7B  LGALS7B [DGVbeta]
ClinVarLGALS7B
snp3D : Map Gene to Disease653499
General knowledge
Homologs : HomoloGeneLGALS7B
Homology/Alignments : Family Browser (UCSC)LGALS7B
Phylogenetic Trees/Animal Genes : TreeFamLGALS7B
Chemical/Protein Interactions : CTD653499
Chemical/Pharm GKB GenePA162393892
Clinical trialLGALS7B
Cancer Resource (Charite)ENSG00000178934
Ontology : AmiGOextracellular space  nucleus  cytoplasm  apoptotic process  heterophilic cell-cell adhesion  carbohydrate binding  
Ontology : EGO-EBIextracellular space  nucleus  cytoplasm  apoptotic process  heterophilic cell-cell adhesion  carbohydrate binding  
Other databases
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
PubGeneLGALS7B
iHOPLGALS7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:46:35 CEST 2013
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