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LHB (luteinizing hormone beta polypeptide)

Identity

Other namesCGB4
LSH-B
hLHB
HGNC (Hugo) LHB
LocusID (NCBI) 3972
Location 19q13.33
Location_base_pair Starts at 49519237 and ends at 49520347 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LHB   6584
Entrez_Gene (NCBI)LHB  3972  luteinizing hormone beta polypeptide
Cards
GeneCards (Weizmann)LHB
Ensembl (Hinxton)ENSG00000104826 [Gene_View]  chr19:49519237-49520347 [Contig_View]  LHB [Vega]
AceView (NCBI)LHB
Genatlas (Paris)LHB
SOURCE (Stanford)NM_000894
Genomic and cartography
GoldenPath (UCSC)LHB  -  19q13.33   chr19:49519237-49520347 -  19q13.33   [Description]    (hg19-Feb_2009)
EnsemblLHB - 19q13.33 [CytoView]
Mapping of homologs : NCBILHB [Mapview]
OMIM152780   
Gene and transcription
Genbank (Entrez)BC160107
RefSeq transcript (SRS)NM_000894
RefSeq transcript (Entrez)NM_000894
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NG_011464 NG_033041 NT_011109 NW_001838497 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_011464 NG_033041 NT_011109 NW_001838497 NW_004078099
Consensus coding sequences : CCDS (NCBI)LHB
Cluster EST : UnigeneHs.154704 [ SRS ] Hs.154704 [ NCBI ]
CGAP (NCI)Hs.154704
Alternative Splicing : Fast-db (Paris)GSHG0040153
Alternative Splicing GalleryENSG00000104826
Gene ExpressionLHB [ NCBI-GEO ]   LHB [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01229 (SRS) P01229 (Uniprot)
NextProtP01229
With graphics : InterProP01229
Splice isoforms : SwissVarP01229(Swissvar)
Domaine pattern : Prosite (SRS)GLYCO_HORMONE_BETA_1 (PS00261)    GLYCO_HORMONE_BETA_2 (PS00689)   
Domaine pattern : Prosite (Expaxy)GLYCO_HORMONE_BETA_1 (PS00261)    GLYCO_HORMONE_BETA_2 (PS00689)   
Domains : Interpro (SRS)Cys_knot    Gonadotropin_bsu    Gonadotropin_bsu_CS   
Domains : Interpro (EBI)Cys_knot    Gonadotropin_bsu    Gonadotropin_bsu_CS   
Related proteins : CluSTrP01229
Domain families : Pfam (SRS)Cys_knot (PF00007)   
Domain families : Pfam (Sanger)Cys_knot (PF00007)   
Domain families : Pfam (NCBI)pfam00007   
Domain families : Smart (EMBL)GHB (SM00068)  
DMDM3972
Blocks (Seattle)P01229
PDB (SRS)1M92   
PDB (PDBSum)1M92   
PDB (IMB)1M92   
PDB (RSDB)1M92   
Human Protein AtlasENSG00000104826
HPRD01072
IPIIPI00000854   IPI00937264   
Protein Interaction databases
DIP (DOE-UCLA)P01229
IntAct (EBI)P01229
FunCoupENSG00000104826
REACTOMELHB
Protein Interaction Database3972
BioGRIDLHB
InParanoidP01229
Interologous Interaction database P01229
IntegromeDBLHB
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)LHB
SNP (GeneSNP Utah)LHB
SNP : HGBaseLHB
Genetic variants : HAPMAPLHB
Somatic Mutations in Cancer : COSMICLHB 
CONAN: Copy Number AnalysisLHB 
Mutations and Diseases : HGMDLHB
OMIM152780   
GENETests152780   
Disease Genetic AssociationLHB
Huge Navigator LHB [HugePedia]  LHB [HugeCancerGEM]
Genomic VariantsLHB  LHB [DGVbeta]
snp3D : Map Gene to Disease3972
General knowledge
Homologs : HomoloGeneLHB
Homology/Alignments : Family Browser (UCSC)LHB
Phylogenetic Trees/Animal Genes : TreeFamLHB
Chemical/Protein Interactions : CTD3972
Chemical/Pharm GKB GenePA30356
Clinical trialLHB
Cancer Resource (Charite)ENSG00000104826
Ontology : AmiGOreceptor binding  hormone activity  extracellular region  progesterone biosynthetic process  signal transduction  cell-cell signaling  male gonad development  peptide hormone processing  cellular nitrogen compound metabolic process  small molecule metabolic process  
Ontology : EGO-EBIreceptor binding  hormone activity  extracellular region  progesterone biosynthetic process  signal transduction  cell-cell signaling  male gonad development  peptide hormone processing  cellular nitrogen compound metabolic process  small molecule metabolic process  
Pathways : KEGGNeuroactive ligand-receptor interactionGnRH signaling pathway
Other databases
Probes
Litterature
PubMed63 Pubmed reference(s) in Entrez
PubGeneLHB
iHOPLHB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:43:50 CEST 2013
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