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LHB (luteinizing hormone beta polypeptide)

Identity

Other namesCGB4
LSH-B
hLHB
HGNC (Hugo) LHB
LocusID (NCBI) 3972
Location 19q13.33
Location_base_pair Starts at 49519237 and ends at 49520347 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LHB   6584
Cards
Entrez_Gene (NCBI)LHB  3972  luteinizing hormone beta polypeptide
GeneCards (Weizmann)LHB
Ensembl (Hinxton)ENSG00000104826 [Gene_View]  chr19:49519237-49520347 [Contig_View]  LHB [Vega]
ICGC DataPortalENSG00000104826
AceView (NCBI)LHB
Genatlas (Paris)LHB
WikiGenes3972
SOURCE (Princeton)NM_000894
Genomic and cartography
GoldenPath (UCSC)LHB  -  19q13.33   chr19:49519237-49520347 -  19q13.33   [Description]    (hg19-Feb_2009)
EnsemblLHB - 19q13.33 [CytoView]
Mapping of homologs : NCBILHB [Mapview]
OMIM152780   
Gene and transcription
Genbank (Entrez)BC160107
RefSeq transcript (Entrez)NM_000894
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_011464 NG_033041 NT_011109 NW_001838497 NW_004929415
Consensus coding sequences : CCDS (NCBI)LHB
Cluster EST : UnigeneHs.154704 [ NCBI ]
CGAP (NCI)Hs.154704
Alternative Splicing : Fast-db (Paris)GSHG0040153
Alternative Splicing GalleryENSG00000104826
Gene ExpressionLHB [ NCBI-GEO ]     LHB [ SEEK ]   LHB [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01229 (Uniprot)
NextProtP01229  [Medical]
With graphics : InterProP01229
Splice isoforms : SwissVarP01229 (Swissvar)
Domaine pattern : Prosite (Expaxy)GLYCO_HORMONE_BETA_1 (PS00261)    GLYCO_HORMONE_BETA_2 (PS00689)   
Domains : Interpro (EBI)Cystine-knot_cytokine    Glyco_hormone_CN    Gonadotropin_bsu    Gonadotropin_bsu_CS   
Related proteins : CluSTrP01229
Domain families : Pfam (Sanger)Cys_knot (PF00007)   
Domain families : Pfam (NCBI)pfam00007   
Domain families : Smart (EMBL)GHB (SM00068)  
DMDM Disease mutations3972
Blocks (Seattle)P01229
PDB (SRS)1M92   
PDB (PDBSum)1M92   
PDB (IMB)1M92   
PDB (RSDB)1M92   
Human Protein AtlasENSG00000104826
Peptide AtlasP01229
HPRD01072
IPIIPI00000854   IPI00937264   
Protein Interaction databases
DIP (DOE-UCLA)P01229
IntAct (EBI)P01229
FunCoupENSG00000104826
BioGRIDLHB
IntegromeDBLHB
STRING (EMBL)LHB
Ontologies - Pathways
QuickGOP01229
Ontology : AmiGOreceptor binding  hormone activity  extracellular region  progesterone biosynthetic process  signal transduction  cell-cell signaling  male gonad development  peptide hormone processing  cellular protein metabolic process  extracellular vesicular exosome  
Ontology : EGO-EBIreceptor binding  hormone activity  extracellular region  progesterone biosynthetic process  signal transduction  cell-cell signaling  male gonad development  peptide hormone processing  cellular protein metabolic process  extracellular vesicular exosome  
Pathways : KEGGNeuroactive ligand-receptor interaction    GnRH signaling pathway    Ovarian steroidogenesis    Prolactin signaling pathway   
Protein Interaction DatabaseLHB
Wikipedia pathwaysLHB
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)LHB
SNP (GeneSNP Utah)LHB
SNP : HGBaseLHB
Genetic variants : HAPMAPLHB
1000_GenomesLHB 
ICGC programENSG00000104826 
CONAN: Copy Number AnalysisLHB 
Somatic Mutations in Cancer : COSMICLHB 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)19:49519237-49520347
Mutations and Diseases : HGMDLHB
OMIM152780   
MedgenLHB
GENETestsLHB
Disease Genetic AssociationLHB
Huge Navigator LHB [HugePedia]  LHB [HugeCancerGEM]
Genomic VariantsLHB  LHB [DGVbeta]
Exome VariantLHB
dbVarLHB
ClinVarLHB
snp3D : Map Gene to Disease3972
General knowledge
Homologs : HomoloGeneLHB
Homology/Alignments : Family Browser (UCSC)LHB
Phylogenetic Trees/Animal Genes : TreeFamLHB
Chemical/Protein Interactions : CTD3972
Chemical/Pharm GKB GenePA30356
Clinical trialLHB
Cancer Resource (Charite)ENSG00000104826
Other databases
Probes
Litterature
PubMed65 Pubmed reference(s) in Entrez
CoreMineLHB
GoPubMedLHB
iHOPLHB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:37:08 CET 2014

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