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LHFPL3-AS1 (LHFPL3 antisense RNA 1)

Identity

Alias_namesLHFPL3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) LHFPL3-AS1
LocusID (NCBI) 645591
Atlas_Id 65250
Location 7q22.2  [Link to chromosome band 7q22]
Location_base_pair Starts at 104796506 and ends at 104804092 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LHFPL3-AS1   40341
Cards
Entrez_Gene (NCBI)LHFPL3-AS1  645591  LHFPL3 antisense RNA 1
Aliases
GeneCards (Weizmann)LHFPL3-AS1
Ensembl hg19 (Hinxton)ENSG00000226869 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226869 [Gene_View]  chr7:104796506-104804092 [Contig_View]  LHFPL3-AS1 [Vega]
ICGC DataPortalENSG00000226869
TCGA cBioPortalLHFPL3-AS1
AceView (NCBI)LHFPL3-AS1
Genatlas (Paris)LHFPL3-AS1
WikiGenes645591
SOURCE (Princeton)LHFPL3-AS1
Genetics Home Reference (NIH)LHFPL3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)LHFPL3-AS1  -     chr7:104796506-104804092 -  7q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LHFPL3-AS1  -     7q22.2   [Description]    (hg19-Feb_2009)
EnsemblLHFPL3-AS1 - 7q22.2 [CytoView hg19]  LHFPL3-AS1 - 7q22.2 [CytoView hg38]
Mapping of homologs : NCBILHFPL3-AS1 [Mapview hg19]  LHFPL3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC012751 BC013905 BU161581
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LHFPL3-AS1
Cluster EST : UnigeneHs.658835 [ NCBI ]
CGAP (NCI)Hs.658835
Alternative Splicing GalleryENSG00000226869
Gene ExpressionLHFPL3-AS1 [ NCBI-GEO ]   LHFPL3-AS1 [ EBI - ARRAY_EXPRESS ]   LHFPL3-AS1 [ SEEK ]   LHFPL3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)LHFPL3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645591
GTEX Portal (Tissue expression)LHFPL3-AS1
Human Protein AtlasENSG00000226869-LHFPL3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LHFPL3-AS1
DMDM Disease mutations645591
Blocks (Seattle)LHFPL3-AS1
Human Protein Atlas [tissue]ENSG00000226869-LHFPL3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000226869
BioGRIDLHFPL3-AS1
STRING (EMBL)LHFPL3-AS1
ZODIACLHFPL3-AS1
Ontologies - Pathways
Huge Navigator LHFPL3-AS1 [HugePedia]
snp3D : Map Gene to Disease645591
BioCentury BCIQLHFPL3-AS1
ClinGenLHFPL3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645591
Clinical trialLHFPL3-AS1
Miscellaneous
canSAR (ICR)LHFPL3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLHFPL3-AS1
EVEXLHFPL3-AS1
GoPubMedLHFPL3-AS1
iHOPLHFPL3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:16:21 CET 2017

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