LHFPL3 (LHFPL tetraspan subfamily member 3)

2014-08-01 Affiliation

Identity

HGNC

LHFPL3

LOCATION

7q22.2

LOCUSID

375612

ALIAS

LHFPL4

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 375612
MIM: 609719
HGNC: 6589
Ensembl: ENSG00000187416

Variants:

dbSNP: 375612
ClinVar: 375612
TCGA: ENSG00000187416
COSMIC: LHFPL3

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000187416	ENST00000401970	C9JA52
ENSG00000187416	ENST00000424859	Q86UP9

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

PharmGKB

Entity ID	Name	Type	Evidence	Association	PK	PD	PMIDs
PA10832	corticosteroids	Chemical	VariantAnnotation	associated		PD	30697902
PA443450	Asthma	Disease	VariantAnnotation	associated		PD	30697902

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
19401682	2010	High-density SNP association study and copy number variation analysis of the AUTS1 and AUTS5 loci implicate the IMMP2L-DOCK4 gene region in autism susceptibility.	52
15905332	2005	A missense mutation in the previously undescribed gene Tmhs underlies deafness in hurry-scurry (hscy) mice.	45
30314994	2019	MiR-218-5p targets LHFPL3 to regulate proliferation, migration, and epithelial-mesenchymal transitions of human glioma cells.	0

Citation

Dessen P

LHFPL3 (LHFPL tetraspan subfamily member 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54424/lhfpl3