LHX4 (LIM homeobox 4)

Identity

Other names	Gsh-4
	Gsh4
HGNC	LHX4
Location	1q25.3
Location_base_pair	Starts at 178466065 and ends at 178510811 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LHX4   21734
Entrez_Gene	LHX4  89884  LIM homeobox 4
	Cards
GeneCards	LHX4
Ensembl	LHX4 [Search_View]   ENSG00000121454 [Gene_View]
Genatlas	LHX4
GeneLynx	LHX4
eGenome	LHX4
euGene	89884
	Genomic and cartography
GoldenPath	LHX4  -  1q25.3   chr1:178466065-178510811 +  1q25.2   [Description]    (hg18-March_2006)
Ensembl	LHX4 - 1q25.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LHX4
	Gene and transcription
Genbank	AB037683 [ ENTREZ ]
Genbank	AB055703 [ ENTREZ ]
Genbank	AB055704 [ ENTREZ ]
Genbank	AF179849 [ ENTREZ ]
Genbank	AF282899 [ ENTREZ ]
RefSeq	NM_033343 [ SRS ]    NM_033343 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NG_008081 [ SRS ]    NG_008081 [ ENTREZ ]
RefSeq	NT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeq	NW_001838533 [ SRS ]    NW_001838533 [ ENTREZ ]
RefSeq	NW_926128 [ SRS ]    NW_926128 [ ENTREZ ]
AceView	LHX4 AceView - NCBI
Unigene	Hs.658487 [ SRS ]    Hs.658487 [ NCBI ]     HS658487 [ spliceNest ]
Fast-db	17618 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5RLJ1 [ SRS]    Q5RLJ1 [ EXPASY ]     Q5RLJ1 [ INTERPRO ]     Q5RLJ1 [ UNIPROT ]
CluSTr	Q5RLJ1
Blocks	Q5RLJ1
HPRD	03686
	Protein Interaction databases
DIP	Q5RLJ1
IntAct	Q5RLJ1
	Polymorphism : SNP, mutations, diseases
OMIM	602146;606606    [ map ]
GENECLINICS	602146;606606
SNP	LHX4 [dbSNP-NCBI]
SNP	NM_033343 [SNP-NCI]
SNP	LHX4 [GeneSNPs - Utah]  LHX4] [HGBASE - SRS]
HAPMAP	LHX4 [HAPMAP]
TICdb	transcription [Translocation breakpoints In Cancer]
HGMD	LHX4
	General knowledge
Family Browser	LHX4 [UCSC Family Browser]
SOURCE	NM_033343
SMD	Hs.658487
SAGE	Hs.658487
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	LHX4
TreeFam	LHX4
CTD	89884 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LHX4 Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:48:34 2008