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LILRA4 (leukocyte immunoglobulin like receptor A4)

Identity

Alias_namesleukocyte immunoglobulin-like receptor
Alias_symbol (synonym)ILT7
CD85g
Other alias
HGNC (Hugo) LILRA4
LocusID (NCBI) 23547
Atlas_Id 53221
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54333185 and ends at 54339169 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LILRA4   15503
Cards
Entrez_Gene (NCBI)LILRA4  23547  leukocyte immunoglobulin like receptor A4
AliasesCD85g; ILT7
GeneCards (Weizmann)LILRA4
Ensembl hg19 (Hinxton)ENSG00000239961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239961 [Gene_View]  ENSG00000239961 [Sequence]  chr19:54333185-54339169 [Contig_View]  LILRA4 [Vega]
ICGC DataPortalENSG00000239961
TCGA cBioPortalLILRA4
AceView (NCBI)LILRA4
Genatlas (Paris)LILRA4
WikiGenes23547
SOURCE (Princeton)LILRA4
Genetics Home Reference (NIH)LILRA4
Genomic and cartography
GoldenPath hg38 (UCSC)LILRA4  -     chr19:54333185-54339169 -  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LILRA4  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblLILRA4 - 19q13.42 [CytoView hg19]  LILRA4 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILILRA4 [Mapview hg19]  LILRA4 [Mapview hg38]
OMIM607517   
Gene and transcription
Genbank (Entrez)AF041261 AF283989 BC038829 BC109198 BC109199
RefSeq transcript (Entrez)NM_012276
RefSeq genomic (Entrez)NC_000019 NT_187693 NW_003571055 NW_003571061
Consensus coding sequences : CCDS (NCBI)LILRA4
Cluster EST : UnigeneHs.406708 [ NCBI ]
CGAP (NCI)Hs.406708
Alternative Splicing GalleryENSG00000239961
Gene ExpressionLILRA4 [ NCBI-GEO ]   LILRA4 [ EBI - ARRAY_EXPRESS ]   LILRA4 [ SEEK ]   LILRA4 [ MEM ]
Gene Expression Viewer (FireBrowse)LILRA4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23547
GTEX Portal (Tissue expression)LILRA4
Human Protein AtlasENSG00000239961-LILRA4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59901   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59901  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59901
Splice isoforms : SwissVarP59901
PhosPhoSitePlusP59901
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)A1B_glyco/leuk_Ig-like_rcpt    Ig-like_dom    Ig-like_dom_sf    Ig-like_fold    Ig_sub    Ig_sub2    Immunoglobulin   
Domain families : Pfam (Sanger)ig (PF00047)    Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam00047    pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)LILRA4
DMDM Disease mutations23547
Blocks (Seattle)LILRA4
SuperfamilyP59901
Human Protein Atlas [tissue]ENSG00000239961-LILRA4 [tissue]
Peptide AtlasP59901
HPRD09596
IPIIPI00017501   IPI00954845   
Protein Interaction databases
DIP (DOE-UCLA)P59901
IntAct (EBI)P59901
FunCoupENSG00000239961
BioGRIDLILRA4
STRING (EMBL)LILRA4
ZODIACLILRA4
Ontologies - Pathways
QuickGOP59901
Ontology : AmiGOsignaling receptor binding  protein binding  integral component of plasma membrane  coreceptor activity  negative regulation of interferon-alpha production  negative regulation of tumor necrosis factor production  Fc-epsilon receptor I complex  negative regulation of toll-like receptor 7 signaling pathway  negative regulation of toll-like receptor 9 signaling pathway  Fc-epsilon receptor signaling pathway  innate immune response  
Ontology : EGO-EBIsignaling receptor binding  protein binding  integral component of plasma membrane  coreceptor activity  negative regulation of interferon-alpha production  negative regulation of tumor necrosis factor production  Fc-epsilon receptor I complex  negative regulation of toll-like receptor 7 signaling pathway  negative regulation of toll-like receptor 9 signaling pathway  Fc-epsilon receptor signaling pathway  innate immune response  
Pathways : KEGGOsteoclast differentiation   
NDEx NetworkLILRA4
Atlas of Cancer Signalling NetworkLILRA4
Wikipedia pathwaysLILRA4
Orthology - Evolution
OrthoDB23547
GeneTree (enSembl)ENSG00000239961
Phylogenetic Trees/Animal Genes : TreeFamLILRA4
HOGENOMP59901
Homologs : HomoloGeneLILRA4
Homology/Alignments : Family Browser (UCSC)LILRA4
Gene fusions - Rearrangements
Fusion : QuiverLILRA4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLILRA4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LILRA4
dbVarLILRA4
ClinVarLILRA4
1000_GenomesLILRA4 
Exome Variant ServerLILRA4
ExAC (Exome Aggregation Consortium)ENSG00000239961
GNOMAD BrowserENSG00000239961
Varsome BrowserLILRA4
Genetic variants : HAPMAP23547
Genomic Variants (DGV)LILRA4 [DGVbeta]
DECIPHERLILRA4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLILRA4 
Mutations
ICGC Data PortalLILRA4 
TCGA Data PortalLILRA4 
Broad Tumor PortalLILRA4
OASIS PortalLILRA4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLILRA4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLILRA4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LILRA4
DgiDB (Drug Gene Interaction Database)LILRA4
DoCM (Curated mutations)LILRA4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LILRA4 (select a term)
intoGenLILRA4
Cancer3DLILRA4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607517   
Orphanet
DisGeNETLILRA4
MedgenLILRA4
Genetic Testing Registry LILRA4
NextProtP59901 [Medical]
TSGene23547
GENETestsLILRA4
Target ValidationLILRA4
Huge Navigator LILRA4 [HugePedia]
snp3D : Map Gene to Disease23547
BioCentury BCIQLILRA4
ClinGenLILRA4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23547
Chemical/Pharm GKB GenePA142671546
Clinical trialLILRA4
Miscellaneous
canSAR (ICR)LILRA4 (select the gene name)
DataMed IndexLILRA4
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLILRA4
EVEXLILRA4
GoPubMedLILRA4
iHOPLILRA4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 17 18:20:21 CET 2019

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