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LILRA5 (leukocyte immunoglobulin like receptor A5)

Identity

Alias_namesLILRB7
leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
Alias_symbol (synonym)ILT11
LIR9
CD85
CD85f
Other aliasCD85F
ILT-11
LIR-9
HGNC (Hugo) LILRA5
LocusID (NCBI) 353514
Atlas_Id 65263
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54307070 and ends at 54313139 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LILRA5   16309
Cards
Entrez_Gene (NCBI)LILRA5  353514  leukocyte immunoglobulin like receptor A5
AliasesCD85; CD85F; ILT-11; ILT11; 
LILRB7; LIR-9; LIR9
GeneCards (Weizmann)LILRA5
Ensembl hg19 (Hinxton)ENSG00000187116 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187116 [Gene_View]  chr19:54307070-54313139 [Contig_View]  LILRA5 [Vega]
ICGC DataPortalENSG00000187116
TCGA cBioPortalLILRA5
AceView (NCBI)LILRA5
Genatlas (Paris)LILRA5
WikiGenes353514
SOURCE (Princeton)LILRA5
Genetics Home Reference (NIH)LILRA5
Genomic and cartography
GoldenPath hg38 (UCSC)LILRA5  -     chr19:54307070-54313139 -  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LILRA5  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblLILRA5 - 19q13.42 [CytoView hg19]  LILRA5 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILILRA5 [Mapview hg19]  LILRA5 [Mapview hg38]
OMIM606047   
Gene and transcription
Genbank (Entrez)AF212842 AF324830 AF499916 AF499917 AF499918
RefSeq transcript (Entrez)NM_021250 NM_181879 NM_181985 NM_181986
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571055 NW_003571061
Consensus coding sequences : CCDS (NCBI)LILRA5
Cluster EST : UnigeneHs.710986 [ NCBI ]
CGAP (NCI)Hs.710986
Alternative Splicing GalleryENSG00000187116
Gene ExpressionLILRA5 [ NCBI-GEO ]   LILRA5 [ EBI - ARRAY_EXPRESS ]   LILRA5 [ SEEK ]   LILRA5 [ MEM ]
Gene Expression Viewer (FireBrowse)LILRA5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353514
GTEX Portal (Tissue expression)LILRA5
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NI73   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NI73  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NI73
Splice isoforms : SwissVarA6NI73
PhosPhoSitePlusA6NI73
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_sub2   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)LILRA5
DMDM Disease mutations353514
Blocks (Seattle)LILRA5
PDB (SRS)2D3V   
PDB (PDBSum)2D3V   
PDB (IMB)2D3V   
PDB (RSDB)2D3V   
Structural Biology KnowledgeBase2D3V   
SCOP (Structural Classification of Proteins)2D3V   
CATH (Classification of proteins structures)2D3V   
SuperfamilyA6NI73
Human Protein AtlasENSG00000187116
Peptide AtlasA6NI73
HPRD06924
IPIIPI00158145   IPI00375191   IPI00376865   IPI00375192   
Protein Interaction databases
DIP (DOE-UCLA)A6NI73
IntAct (EBI)A6NI73
FunCoupENSG00000187116
BioGRIDLILRA5
STRING (EMBL)LILRA5
ZODIACLILRA5
Ontologies - Pathways
QuickGOA6NI73
Ontology : AmiGOplasma membrane  integral component of membrane  innate immune response  extracellular exosome  
Ontology : EGO-EBIplasma membrane  integral component of membrane  innate immune response  extracellular exosome  
Pathways : KEGGOsteoclast differentiation   
NDEx NetworkLILRA5
Atlas of Cancer Signalling NetworkLILRA5
Wikipedia pathwaysLILRA5
Orthology - Evolution
OrthoDB353514
GeneTree (enSembl)ENSG00000187116
Phylogenetic Trees/Animal Genes : TreeFamLILRA5
HOVERGENA6NI73
HOGENOMA6NI73
Homologs : HomoloGeneLILRA5
Homology/Alignments : Family Browser (UCSC)LILRA5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLILRA5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LILRA5
dbVarLILRA5
ClinVarLILRA5
1000_GenomesLILRA5 
Exome Variant ServerLILRA5
ExAC (Exome Aggregation Consortium)LILRA5 (select the gene name)
Genetic variants : HAPMAP353514
Genomic Variants (DGV)LILRA5 [DGVbeta]
DECIPHERLILRA5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLILRA5 
Mutations
ICGC Data PortalLILRA5 
TCGA Data PortalLILRA5 
Broad Tumor PortalLILRA5
OASIS PortalLILRA5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLILRA5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLILRA5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LILRA5
DgiDB (Drug Gene Interaction Database)LILRA5
DoCM (Curated mutations)LILRA5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LILRA5 (select a term)
intoGenLILRA5
Cancer3DLILRA5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606047   
Orphanet
MedgenLILRA5
Genetic Testing Registry LILRA5
NextProtA6NI73 [Medical]
TSGene353514
GENETestsLILRA5
Huge Navigator LILRA5 [HugePedia]
snp3D : Map Gene to Disease353514
BioCentury BCIQLILRA5
ClinGenLILRA5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353514
Chemical/Pharm GKB GenePA142671547
Clinical trialLILRA5
Miscellaneous
canSAR (ICR)LILRA5 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLILRA5
EVEXLILRA5
GoPubMedLILRA5
iHOPLILRA5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:19:26 CEST 2017

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