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LILRB5 (leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5)

Identity

Alias_namesleukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
Alias_symbol (synonym)LIR-8
LIR8
CD85c
Other aliasCD85C
HGNC (Hugo) LILRB5
LocusID (NCBI) 10990
Atlas_Id 65266
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54754269 and ends at 54761171 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LILRB5   6609
Cards
Entrez_Gene (NCBI)LILRB5  10990  leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
AliasesCD85C; LIR-8; LIR8
GeneCards (Weizmann)LILRB5
Ensembl hg19 (Hinxton)ENSG00000105609 [Gene_View]  chr19:54754269-54761171 [Contig_View]  LILRB5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000105609 [Gene_View]  chr19:54754269-54761171 [Contig_View]  LILRB5 [Vega]
ICGC DataPortalENSG00000105609
TCGA cBioPortalLILRB5
AceView (NCBI)LILRB5
Genatlas (Paris)LILRB5
WikiGenes10990
SOURCE (Princeton)LILRB5
Genetics Home Reference (NIH)LILRB5
Genomic and cartography
GoldenPath hg19 (UCSC)LILRB5  -     chr19:54754269-54761171 -  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LILRB5  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblLILRB5 - 19q13.42 [CytoView hg19]  LILRB5 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBILILRB5 [Mapview hg19]  LILRB5 [Mapview hg38]
OMIM604814   
Gene and transcription
Genbank (Entrez)AF025534 AK057072 AK090399 AK092867 AK096122
RefSeq transcript (Entrez)NM_001081442 NM_001081443 NM_001304457 NM_006840
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NT_187693 NW_003571054 NW_003571060 NW_003571061 NW_004929415
Consensus coding sequences : CCDS (NCBI)LILRB5
Cluster EST : UnigeneHs.655338 [ NCBI ]
CGAP (NCI)Hs.655338
Alternative Splicing GalleryENSG00000105609
Gene ExpressionLILRB5 [ NCBI-GEO ]   LILRB5 [ EBI - ARRAY_EXPRESS ]   LILRB5 [ SEEK ]   LILRB5 [ MEM ]
Gene Expression Viewer (FireBrowse)LILRB5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10990
GTEX Portal (Tissue expression)LILRB5
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75023   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75023  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75023
Splice isoforms : SwissVarO75023
PhosPhoSitePlusO75023
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)LILRB5
DMDM Disease mutations10990
Blocks (Seattle)LILRB5
SuperfamilyO75023
Human Protein AtlasENSG00000105609
Peptide AtlasO75023
HPRD11993
IPIIPI00009961   IPI00376862   IPI00829955   IPI00179120   IPI01015324   IPI00893901   IPI00894028   IPI01015829   IPI01009267   IPI00917722   
Protein Interaction databases
DIP (DOE-UCLA)O75023
IntAct (EBI)O75023
FunCoupENSG00000105609
BioGRIDLILRB5
STRING (EMBL)LILRB5
ZODIACLILRB5
Ontologies - Pathways
QuickGOO75023
Ontology : AmiGOimmune system process  transmembrane signaling receptor activity  defense response  cell surface receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIimmune system process  transmembrane signaling receptor activity  defense response  cell surface receptor signaling pathway  integral component of membrane  
Pathways : KEGGOsteoclast differentiation   
NDEx NetworkLILRB5
Atlas of Cancer Signalling NetworkLILRB5
Wikipedia pathwaysLILRB5
Orthology - Evolution
OrthoDB10990
GeneTree (enSembl)ENSG00000105609
Phylogenetic Trees/Animal Genes : TreeFamLILRB5
HOVERGENO75023
HOGENOMO75023
Homologs : HomoloGeneLILRB5
Homology/Alignments : Family Browser (UCSC)LILRB5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLILRB5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LILRB5
dbVarLILRB5
ClinVarLILRB5
1000_GenomesLILRB5 
Exome Variant ServerLILRB5
ExAC (Exome Aggregation Consortium)LILRB5 (select the gene name)
Genetic variants : HAPMAP10990
Genomic Variants (DGV)LILRB5 [DGVbeta]
DECIPHER (Syndromes)19:54754269-54761171  ENSG00000105609
CONAN: Copy Number AnalysisLILRB5 
Mutations
ICGC Data PortalLILRB5 
TCGA Data PortalLILRB5 
Broad Tumor PortalLILRB5
OASIS PortalLILRB5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLILRB5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLILRB5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LILRB5
DgiDB (Drug Gene Interaction Database)LILRB5
DoCM (Curated mutations)LILRB5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LILRB5 (select a term)
intoGenLILRB5
Cancer3DLILRB5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604814   
Orphanet
MedgenLILRB5
Genetic Testing Registry LILRB5
NextProtO75023 [Medical]
TSGene10990
GENETestsLILRB5
Huge Navigator LILRB5 [HugePedia]
snp3D : Map Gene to Disease10990
BioCentury BCIQLILRB5
ClinGenLILRB5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10990
Chemical/Pharm GKB GenePA30383
Clinical trialLILRB5
Miscellaneous
canSAR (ICR)LILRB5 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLILRB5
EVEXLILRB5
GoPubMedLILRB5
iHOPLILRB5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:03 CET 2017

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