Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LIMS3-LOC440895 (LIMS3-LOC440895 readthrough)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100271835
Atlas_Id 65275
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 109898432 and ends at 109968572 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LIMS3-LOC440895    LIMS3-LOC440895 readthrough
Aliases
GeneCards (Weizmann)LIMS3-LOC440895
Ensembl hg19 (Hinxton)ENSG00000284337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284337 [Gene_View]  ENSG00000284337 [Sequence]  chr2:109898432-109968572 [Contig_View]  LIMS3-LOC440895 [Vega]
ICGC DataPortalENSG00000284337
TCGA cBioPortalLIMS3-LOC440895
AceView (NCBI)LIMS3-LOC440895
Genatlas (Paris)LIMS3-LOC440895
SOURCE (Princeton)LIMS3-LOC440895
Genetics Home Reference (NIH)LIMS3-LOC440895
Genomic and cartography
GoldenPath hg38 (UCSC)LIMS3-LOC440895  -     chr2:109898432-109968572 +  2q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LIMS3-LOC440895  -     2q13   [Description]    (hg19-Feb_2009)
GoldenPathLIMS3-LOC440895 - 2q13 [CytoView hg19]  LIMS3-LOC440895 - 2q13 [CytoView hg38]
ImmunoBaseENSG00000284337
Genome Data Viewer NCBILIMS3-LOC440895 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK023300 AL133596 BC094740 OA987253
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LIMS3-LOC440895
Gene ExpressionLIMS3-LOC440895 [ NCBI-GEO ]   LIMS3-LOC440895 [ EBI - ARRAY_EXPRESS ]   LIMS3-LOC440895 [ SEEK ]   LIMS3-LOC440895 [ MEM ]
Gene Expression Viewer (FireBrowse)LIMS3-LOC440895 [ Firebrowse - Broad ]
GenevisibleExpression of LIMS3-LOC440895 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100271835
GTEX Portal (Tissue expression)LIMS3-LOC440895
Human Protein AtlasENSG00000284337-LIMS3-LOC440895 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LIMS3-LOC440895
Human Protein Atlas [tissue]ENSG00000284337-LIMS3-LOC440895 [tissue]
Protein Interaction databases
BioGRIDLIMS3-LOC440895
STRING (EMBL)LIMS3-LOC440895
ZODIACLIMS3-LOC440895
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLIMS3-LOC440895
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:55:40 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.