LIMS3 (LIM zinc finger domain containing 3)

2014-11-01  

Identity

HGNC
LIMS3
LOCATION
2q13
LOCUSID
96626
ALIAS
LIMS3L,LIMS4,PINCH-3

Other Information

Locus ID:

NCBI: 96626
HGNC: 30047
Ensembl: ENSG00000256977

Variants:

dbSNP: 96626
ClinVar: 96626
TCGA: ENSG00000256977
COSMIC: LIMS3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000256977ENST00000437679P0CW19
ENSG00000256977ENST00000480744A0A0J9YXC7
ENSG00000256977ENST00000487150A0A0J9YYC1
ENSG00000256977ENST00000631420P0CW19

Expression (GTEx)

0
1
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
174352762007Molecular cloning and characterization of a novel splice variant of the LIM domain family gene, PINCH 2, in human testis.0

Citation

Dessen P

LIMS3 (LIM zinc finger domain containing 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/65273/lims3