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LINC-ROR (long intergenic non-protein coding RNA, regulator of reprogramming)

Identity

Alias_symbol (synonym)lincRNA-RoR
lincRNA-ST8SIA3
ROR
Other alias
HGNC (Hugo) LINC-ROR
LocusID (NCBI) 100885779
Atlas_Id 53995
Location 18q21.31  [Link to chromosome band 18q21]
Location_base_pair Starts at 57054573 and ends at 57072119 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC-ROR   43773
Cards
Entrez_Gene (NCBI)LINC-ROR  100885779  long intergenic non-protein coding RNA, regulator of reprogramming
AliasesROR; lincRNA-RoR
GeneCards (Weizmann)LINC-ROR
Ensembl hg19 (Hinxton)ENSG00000258609 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258609 [Gene_View]  chr18:57054573-57072119 [Contig_View]  LINC-ROR [Vega]
ICGC DataPortalENSG00000258609
TCGA cBioPortalLINC-ROR
AceView (NCBI)LINC-ROR
Genatlas (Paris)LINC-ROR
WikiGenes100885779
SOURCE (Princeton)LINC-ROR
Genetics Home Reference (NIH)LINC-ROR
Genomic and cartography
GoldenPath hg38 (UCSC)LINC-ROR  -     chr18:57054573-57072119 -  18q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC-ROR  -     18q21.31   [Description]    (hg19-Feb_2009)
EnsemblLINC-ROR - 18q21.31 [CytoView hg19]  LINC-ROR - 18q21.31 [CytoView hg38]
Mapping of homologs : NCBILINC-ROR [Mapview hg19]  LINC-ROR [Mapview hg38]
OMIM615173   
Gene and transcription
Genbank (Entrez)AB844430 AB844432 AB908956 HG975412 HQ315778
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC-ROR
Cluster EST : UnigeneHs.742426 [ NCBI ]
CGAP (NCI)Hs.742426
Alternative Splicing GalleryENSG00000258609
Gene ExpressionLINC-ROR [ NCBI-GEO ]   LINC-ROR [ EBI - ARRAY_EXPRESS ]   LINC-ROR [ SEEK ]   LINC-ROR [ MEM ]
Gene Expression Viewer (FireBrowse)LINC-ROR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885779
GTEX Portal (Tissue expression)LINC-ROR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC-ROR
DMDM Disease mutations100885779
Blocks (Seattle)LINC-ROR
Human Protein AtlasENSG00000258609
Protein Interaction databases
FunCoupENSG00000258609
BioGRIDLINC-ROR
STRING (EMBL)LINC-ROR
ZODIACLINC-ROR
Ontologies - Pathways
Huge Navigator LINC-ROR [HugePedia]
snp3D : Map Gene to Disease100885779
BioCentury BCIQLINC-ROR
ClinGenLINC-ROR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885779
Clinical trialLINC-ROR
Miscellaneous
canSAR (ICR)LINC-ROR (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC-ROR
EVEXLINC-ROR
GoPubMedLINC-ROR
iHOPLINC-ROR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Jun 7 12:40:43 CEST 2017

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