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LINC00028 (long intergenic non-protein coding RNA 28)

Identity

Alias_namesC20orf93
NCRNA00028
chromosome 20 open reading frame 93
non-protein coding RNA 28
Alias_symbol (synonym)dJ1093G12.6
Other alias
HGNC (Hugo) LINC00028
LocusID (NCBI) 140875
Atlas_Id 65282
Location 20q11.21  [Link to chromosome band 20q11]
Location_base_pair Starts at 31485778 and ends at 31487574 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00028   16224
Cards
Entrez_Gene (NCBI)LINC00028  140875  long intergenic non-protein coding RNA 28
AliasesC20orf93; NCRNA00028; dJ1093G12.6
GeneCards (Weizmann)LINC00028
Ensembl hg19 (Hinxton)ENSG00000233354 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233354 [Gene_View]  chr20:31485778-31487574 [Contig_View]  LINC00028 [Vega]
ICGC DataPortalENSG00000233354
TCGA cBioPortalLINC00028
AceView (NCBI)LINC00028
Genatlas (Paris)LINC00028
WikiGenes140875
SOURCE (Princeton)LINC00028
Genetics Home Reference (NIH)LINC00028
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00028  -     chr20:31485778-31487574 +  20q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00028  -     20q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC00028 - 20q11.21 [CytoView hg19]  LINC00028 - 20q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC00028 [Mapview hg19]  LINC00028 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI675392 BX280465
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00028
Cluster EST : UnigeneHs.283478 [ NCBI ]
CGAP (NCI)Hs.283478
Alternative Splicing GalleryENSG00000233354
Gene ExpressionLINC00028 [ NCBI-GEO ]   LINC00028 [ EBI - ARRAY_EXPRESS ]   LINC00028 [ SEEK ]   LINC00028 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00028 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)140875
GTEX Portal (Tissue expression)LINC00028
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00028
DMDM Disease mutations140875
Blocks (Seattle)LINC00028
Human Protein AtlasENSG00000233354
Protein Interaction databases
FunCoupENSG00000233354
BioGRIDLINC00028
STRING (EMBL)LINC00028
ZODIACLINC00028
Ontologies - Pathways
Huge Navigator LINC00028 [HugePedia]
snp3D : Map Gene to Disease140875
BioCentury BCIQLINC00028
ClinGenLINC00028
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140875
Chemical/Pharm GKB GenePA164723569
Clinical trialLINC00028
Miscellaneous
canSAR (ICR)LINC00028 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00028
EVEXLINC00028
GoPubMedLINC00028
iHOPLINC00028
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:55:56 CEST 2017

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