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LINC00111 (long intergenic non-protein coding RNA 111)

Identity

Alias_namesC21orf21
NCRNA00111
chromosome 21 open reading frame 21
non-protein coding RNA 111
Other alias
HGNC (Hugo) LINC00111
LocusID (NCBI) 54090
Atlas_Id 65291
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 41679302 and ends at 41697336 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00111   1262
Cards
Entrez_Gene (NCBI)LINC00111  54090  long intergenic non-protein coding RNA 111
AliasesC21orf21; NCRNA00111
GeneCards (Weizmann)LINC00111
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:41679302-41697336 [Contig_View]  LINC00111 [Vega]
TCGA cBioPortalLINC00111
AceView (NCBI)LINC00111
Genatlas (Paris)LINC00111
WikiGenes54090
SOURCE (Princeton)LINC00111
Genetics Home Reference (NIH)LINC00111
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00111  -     chr21:41679302-41697336 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00111  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00111 - 21q22.3 [CytoView hg19]  LINC00111 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00111 [Mapview hg19]  LINC00111 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX099637
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00111
Cluster EST : UnigeneHs.570442 [ NCBI ]
CGAP (NCI)Hs.570442
Gene ExpressionLINC00111 [ NCBI-GEO ]   LINC00111 [ EBI - ARRAY_EXPRESS ]   LINC00111 [ SEEK ]   LINC00111 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00111 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54090
GTEX Portal (Tissue expression)LINC00111
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00111
DMDM Disease mutations54090
Blocks (Seattle)LINC00111
Protein Interaction databases
BioGRIDLINC00111
STRING (EMBL)LINC00111
ZODIACLINC00111
Ontologies - Pathways
Huge Navigator LINC00111 [HugePedia]
snp3D : Map Gene to Disease54090
BioCentury BCIQLINC00111
ClinGenLINC00111
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54090
Chemical/Pharm GKB GenePA164723658
Clinical trialLINC00111
Miscellaneous
canSAR (ICR)LINC00111 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00111
EVEXLINC00111
GoPubMedLINC00111
iHOPLINC00111
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:19:13 CEST 2017

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