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LINC00113 (long intergenic non-protein coding RNA 113)

Identity

Alias_namesC21orf23
NCRNA00113
chromosome 21 open reading frame 23
non-protein coding RNA 113
Other alias
HGNC (Hugo) LINC00113
LocusID (NCBI) 54088
Atlas_Id 65293
Location 21q21.3  [Link to chromosome band 21q21]
Location_base_pair Starts at 27722379 and ends at 27751233 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00113   1264
Cards
Entrez_Gene (NCBI)LINC00113  54088  long intergenic non-protein coding RNA 113
AliasesC21orf23; NCRNA00113
GeneCards (Weizmann)LINC00113
Ensembl hg19 (Hinxton)ENSG00000225298 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225298 [Gene_View]  chr21:27722379-27751233 [Contig_View]  LINC00113 [Vega]
ICGC DataPortalENSG00000225298
TCGA cBioPortalLINC00113
AceView (NCBI)LINC00113
Genatlas (Paris)LINC00113
WikiGenes54088
SOURCE (Princeton)LINC00113
Genetics Home Reference (NIH)LINC00113
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00113  -     chr21:27722379-27751233 +  21q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00113  -     21q21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00113 - 21q21.3 [CytoView hg19]  LINC00113 - 21q21.3 [CytoView hg38]
Mapping of homologs : NCBILINC00113 [Mapview hg19]  LINC00113 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI261615 AI793052 BF434914
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00113
Cluster EST : UnigeneHs.570434 [ NCBI ]
CGAP (NCI)Hs.570434
Alternative Splicing GalleryENSG00000225298
Gene ExpressionLINC00113 [ NCBI-GEO ]   LINC00113 [ EBI - ARRAY_EXPRESS ]   LINC00113 [ SEEK ]   LINC00113 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00113 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54088
GTEX Portal (Tissue expression)LINC00113
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00113
DMDM Disease mutations54088
Blocks (Seattle)LINC00113
Human Protein AtlasENSG00000225298
Protein Interaction databases
FunCoupENSG00000225298
BioGRIDLINC00113
STRING (EMBL)LINC00113
ZODIACLINC00113
Ontologies - Pathways
Huge Navigator LINC00113 [HugePedia]
snp3D : Map Gene to Disease54088
BioCentury BCIQLINC00113
ClinGenLINC00113
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54088
Chemical/Pharm GKB GenePA164723660
Clinical trialLINC00113
Miscellaneous
canSAR (ICR)LINC00113 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00113
EVEXLINC00113
GoPubMedLINC00113
iHOPLINC00113
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:19:33 CEST 2017

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