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LINC00115 (long intergenic non-protein coding RNA 115)

Identity

Alias_namesNCRNA00115
non-protein coding RNA 115
Alias_symbol (synonym)FLJ22639
Other alias
HGNC (Hugo) LINC00115
LocusID (NCBI) 79854
Atlas_Id 65295
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 826206 and ends at 827506 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00115   26211
Cards
Entrez_Gene (NCBI)LINC00115  79854  long intergenic non-protein coding RNA 115
AliasesNCRNA00115
GeneCards (Weizmann)LINC00115
Ensembl hg19 (Hinxton)ENSG00000225880 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225880 [Gene_View]  chr1:826206-827506 [Contig_View]  LINC00115 [Vega]
ICGC DataPortalENSG00000225880
TCGA cBioPortalLINC00115
AceView (NCBI)LINC00115
Genatlas (Paris)LINC00115
WikiGenes79854
SOURCE (Princeton)LINC00115
Genetics Home Reference (NIH)LINC00115
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00115  -     chr1:826206-827506 -  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00115  -     1p36.33   [Description]    (hg19-Feb_2009)
EnsemblLINC00115 - 1p36.33 [CytoView hg19]  LINC00115 - 1p36.33 [CytoView hg38]
Mapping of homologs : NCBILINC00115 [Mapview hg19]  LINC00115 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026292 BC017762
RefSeq transcript (Entrez)NM_024796
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00115
Cluster EST : UnigeneHs.351445 [ NCBI ]
CGAP (NCI)Hs.351445
Alternative Splicing GalleryENSG00000225880
Gene ExpressionLINC00115 [ NCBI-GEO ]   LINC00115 [ EBI - ARRAY_EXPRESS ]   LINC00115 [ SEEK ]   LINC00115 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00115 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)79854
GTEX Portal (Tissue expression)LINC00115
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00115
DMDM Disease mutations79854
Blocks (Seattle)LINC00115
Human Protein AtlasENSG00000225880
HPRD08000
IPIIPI00015660   
Protein Interaction databases
FunCoupENSG00000225880
BioGRIDLINC00115
STRING (EMBL)LINC00115
ZODIACLINC00115
Ontologies - Pathways
Huge Navigator LINC00115 [HugePedia]
snp3D : Map Gene to Disease79854
BioCentury BCIQLINC00115
ClinGenLINC00115
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79854
Chemical/Pharm GKB GenePA164723665
Clinical trialLINC00115
Miscellaneous
canSAR (ICR)LINC00115 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00115
EVEXLINC00115
GoPubMedLINC00115
iHOPLINC00115
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:55:59 CEST 2017

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