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LINC00165 (long intergenic non-protein coding RNA 165)

Identity

Alias_namesC21orf135
NCRNA00165
chromosome 21 open reading frame 135
non-protein coding RNA 165
Alias_symbol (synonym)NLC1-B
Other aliasNLC1B
HGNC (Hugo) LINC00165
LocusID (NCBI) 727701
Atlas_Id 65302
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44994364 and ends at 44995185 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC00165   33166
Cards
Entrez_Gene (NCBI)LINC00165  727701  long intergenic non-protein coding RNA 165
AliasesC21orf135; NCRNA00165; NLC1-B; NLC1B
GeneCards (Weizmann)LINC00165
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:44994364-44995185 [Contig_View]  LINC00165 [Vega]
TCGA cBioPortalLINC00165
AceView (NCBI)LINC00165
Genatlas (Paris)LINC00165
WikiGenes727701
SOURCE (Princeton)LINC00165
Genetics Home Reference (NIH)LINC00165
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00165  -     chr21:44994364-44995185 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00165  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00165 - 21q22.3 [CytoView hg19]  LINC00165 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00165 [Mapview hg19]  LINC00165 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC009635
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00165
Cluster EST : UnigeneHs.382029 [ NCBI ]
CGAP (NCI)Hs.382029
Gene ExpressionLINC00165 [ NCBI-GEO ]   LINC00165 [ EBI - ARRAY_EXPRESS ]   LINC00165 [ SEEK ]   LINC00165 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00165 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727701
GTEX Portal (Tissue expression)LINC00165
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00165
DMDM Disease mutations727701
Blocks (Seattle)LINC00165
IPIIPI00978140   
Protein Interaction databases
BioGRIDLINC00165
STRING (EMBL)LINC00165
ZODIACLINC00165
Ontologies - Pathways
Huge Navigator LINC00165 [HugePedia]
snp3D : Map Gene to Disease727701
BioCentury BCIQLINC00165
ClinGenLINC00165
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727701
Chemical/Pharm GKB GenePA165378435
Clinical trialLINC00165
Miscellaneous
canSAR (ICR)LINC00165 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00165
EVEXLINC00165
GoPubMedLINC00165
iHOPLINC00165
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:47 CEST 2017

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