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LINC00221 (long intergenic non-protein coding RNA 221)

Identity

Alias_namesC14orf98
NCRNA00221
chromosome 14 open reading frame 98
non-protein coding RNA 221
Other alias
HGNC (Hugo) LINC00221
LocusID (NCBI) 338005
Atlas_Id 65317
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 106482439 and ends at 106495515 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00221   20169
Cards
Entrez_Gene (NCBI)LINC00221  338005  long intergenic non-protein coding RNA 221
AliasesC14orf98; NCRNA00221
GeneCards (Weizmann)LINC00221
Ensembl hg19 (Hinxton)ENSG00000270816 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270816 [Gene_View]  chr14:106482439-106495515 [Contig_View]  LINC00221 [Vega]
ICGC DataPortalENSG00000270816
TCGA cBioPortalLINC00221
AceView (NCBI)LINC00221
Genatlas (Paris)LINC00221
WikiGenes338005
SOURCE (Princeton)LINC00221
Genetics Home Reference (NIH)LINC00221
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00221  -     chr14:106482439-106495515 +  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00221  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblLINC00221 - 14q32.33 [CytoView hg19]  LINC00221 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBILINC00221 [Mapview hg19]  LINC00221 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058096 BX161407 BX248748 BX356743 DB461309
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_001019 NT_187600
Consensus coding sequences : CCDS (NCBI)LINC00221
Cluster EST : UnigeneHs.322826 [ NCBI ]
CGAP (NCI)Hs.322826
Alternative Splicing GalleryENSG00000270816
Gene ExpressionLINC00221 [ NCBI-GEO ]   LINC00221 [ EBI - ARRAY_EXPRESS ]   LINC00221 [ SEEK ]   LINC00221 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00221 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338005
GTEX Portal (Tissue expression)LINC00221
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00221
DMDM Disease mutations338005
Blocks (Seattle)LINC00221
Human Protein AtlasENSG00000270816
IPIIPI00929279   
Protein Interaction databases
FunCoupENSG00000270816
BioGRIDLINC00221
STRING (EMBL)LINC00221
ZODIACLINC00221
Ontologies - Pathways
Huge Navigator LINC00221 [HugePedia]
snp3D : Map Gene to Disease338005
BioCentury BCIQLINC00221
ClinGenLINC00221
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338005
Chemical/Pharm GKB GenePA165479204
Clinical trialLINC00221
Miscellaneous
canSAR (ICR)LINC00221 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00221
EVEXLINC00221
GoPubMedLINC00221
iHOPLINC00221
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:19:40 CEST 2017

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