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LINC00222 (long intergenic non-protein coding RNA 222)

Identity

Alias_namesC6orf181
NCRNA00222
chromosome 6 open reading frame 181
non-protein coding RNA 222
Alias_symbol (synonym)dJ354J5.2
Other alias
HGNC (Hugo) LINC00222
LocusID (NCBI) 387111
Atlas_Id 65318
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 108751654 and ends at 108769942 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00222   21560
Cards
Entrez_Gene (NCBI)LINC00222  387111  long intergenic non-protein coding RNA 222
AliasesC6orf181; NCRNA00222; dJ354J5.2
GeneCards (Weizmann)LINC00222
Ensembl hg19 (Hinxton)ENSG00000203801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203801 [Gene_View]  chr6:108751654-108769942 [Contig_View]  LINC00222 [Vega]
ICGC DataPortalENSG00000203801
TCGA cBioPortalLINC00222
AceView (NCBI)LINC00222
Genatlas (Paris)LINC00222
WikiGenes387111
SOURCE (Princeton)LINC00222
Genetics Home Reference (NIH)LINC00222
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00222  -     chr6:108751654-108769942 +  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00222  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblLINC00222 - 6q21 [CytoView hg19]  LINC00222 - 6q21 [CytoView hg38]
Mapping of homologs : NCBILINC00222 [Mapview hg19]  LINC00222 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY927443 AY927444 AY927445 AY927446 AY927447
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00222
Cluster EST : UnigeneHs.520310 [ NCBI ]
CGAP (NCI)Hs.520310
Alternative Splicing GalleryENSG00000203801
Gene ExpressionLINC00222 [ NCBI-GEO ]   LINC00222 [ EBI - ARRAY_EXPRESS ]   LINC00222 [ SEEK ]   LINC00222 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00222 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387111
GTEX Portal (Tissue expression)LINC00222
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00222
DMDM Disease mutations387111
Blocks (Seattle)LINC00222
Human Protein AtlasENSG00000203801
Protein Interaction databases
FunCoupENSG00000203801
BioGRIDLINC00222
STRING (EMBL)LINC00222
ZODIACLINC00222
Ontologies - Pathways
Huge Navigator LINC00222 [HugePedia]
snp3D : Map Gene to Disease387111
BioCentury BCIQLINC00222
ClinGenLINC00222
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387111
Chemical/Pharm GKB GenePA165618131
Clinical trialLINC00222
Miscellaneous
canSAR (ICR)LINC00222 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00222
EVEXLINC00222
GoPubMedLINC00222
iHOPLINC00222
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:04 CEST 2017

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