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LINC00239 (long intergenic non-protein coding RNA 239)

Identity

Alias_namesC14orf72
NCRNA00239
chromosome 14 open reading frame 72
non-protein coding RNA 239
Other alias
HGNC (Hugo) LINC00239
LocusID (NCBI) 145200
Atlas_Id 65323
Location 14q32.31  [Link to chromosome band 14q32]
Location_base_pair Starts at 102196774 and ends at 102198862 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00239   20119
Cards
Entrez_Gene (NCBI)LINC00239  145200  long intergenic non-protein coding RNA 239
AliasesC14orf72; NCRNA00239
GeneCards (Weizmann)LINC00239
Ensembl hg19 (Hinxton)ENSG00000258512 [Gene_View]  chr14:102196774-102198862 [Contig_View]  LINC00239 [Vega]
Ensembl hg38 (Hinxton)ENSG00000258512 [Gene_View]  chr14:102196774-102198862 [Contig_View]  LINC00239 [Vega]
ICGC DataPortalENSG00000258512
TCGA cBioPortalLINC00239
AceView (NCBI)LINC00239
Genatlas (Paris)LINC00239
WikiGenes145200
SOURCE (Princeton)LINC00239
Genetics Home Reference (NIH)LINC00239
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00239  -     chr14:102196774-102198862 +  14q32.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00239  -     14q32.31   [Description]    (hg38-Dec_2013)
EnsemblLINC00239 - 14q32.31 [CytoView hg19]  LINC00239 - 14q32.31 [CytoView hg38]
Mapping of homologs : NCBILINC00239 [Mapview hg19]  LINC00239 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI304659 BX113211 CK904714 LN608555
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)LINC00239
Cluster EST : UnigeneHs.150840 [ NCBI ]
CGAP (NCI)Hs.150840
Alternative Splicing GalleryENSG00000258512
Gene ExpressionLINC00239 [ NCBI-GEO ]   LINC00239 [ EBI - ARRAY_EXPRESS ]   LINC00239 [ SEEK ]   LINC00239 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00239 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)145200
GTEX Portal (Tissue expression)LINC00239
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00239
DMDM Disease mutations145200
Blocks (Seattle)LINC00239
Human Protein AtlasENSG00000258512
Protein Interaction databases
FunCoupENSG00000258512
BioGRIDLINC00239
STRING (EMBL)LINC00239
ZODIACLINC00239
Ontologies - Pathways
Huge Navigator LINC00239 [HugePedia]
snp3D : Map Gene to Disease145200
BioCentury BCIQLINC00239
ClinGenLINC00239
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145200
Chemical/Pharm GKB GenePA165479225
Clinical trialLINC00239
Miscellaneous
canSAR (ICR)LINC00239 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00239
EVEXLINC00239
GoPubMedLINC00239
iHOPLINC00239
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:11:15 CET 2017

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