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LINC00240 (long intergenic non-protein coding RNA 240)

Identity

Alias_namesC6orf41
NCRNA00240
chromosome 6 open reading frame 41
non-protein coding RNA 240
Alias_symbol (synonym)bA373D17.1
Other alias
HGNC (Hugo) LINC00240
LocusID (NCBI) 100133205
Atlas_Id 65324
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26956993 and ends at 27023974 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00240   18772
Cards
Entrez_Gene (NCBI)LINC00240  100133205  long intergenic non-protein coding RNA 240
AliasesC6orf41; NCRNA00240; bA373D17.1
GeneCards (Weizmann)LINC00240
Ensembl hg19 (Hinxton)ENSG00000224843 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224843 [Gene_View]  chr6:26956993-27023974 [Contig_View]  LINC00240 [Vega]
ICGC DataPortalENSG00000224843
TCGA cBioPortalLINC00240
AceView (NCBI)LINC00240
Genatlas (Paris)LINC00240
WikiGenes100133205
SOURCE (Princeton)LINC00240
Genetics Home Reference (NIH)LINC00240
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00240  -     chr6:26956993-27023974 +  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00240  -     6p22.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00240 - 6p22.2 [CytoView hg19]  LINC00240 - 6p22.2 [CytoView hg38]
Mapping of homologs : NCBILINC00240 [Mapview hg19]  LINC00240 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI028608 BC031943 BC044768 BX647648
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00240
Cluster EST : UnigeneHs.526951 [ NCBI ]
CGAP (NCI)Hs.526951
Alternative Splicing GalleryENSG00000224843
Gene ExpressionLINC00240 [ NCBI-GEO ]   LINC00240 [ EBI - ARRAY_EXPRESS ]   LINC00240 [ SEEK ]   LINC00240 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00240 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100133205
GTEX Portal (Tissue expression)LINC00240
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00240
DMDM Disease mutations100133205
Blocks (Seattle)LINC00240
Human Protein AtlasENSG00000224843
Protein Interaction databases
FunCoupENSG00000224843
BioGRIDLINC00240
STRING (EMBL)LINC00240
ZODIACLINC00240
Ontologies - Pathways
Huge Navigator LINC00240 [HugePedia]
snp3D : Map Gene to Disease100133205
BioCentury BCIQLINC00240
ClinGenLINC00240
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100133205
Chemical/Pharm GKB GenePA165618156
Clinical trialLINC00240
Miscellaneous
canSAR (ICR)LINC00240 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00240
EVEXLINC00240
GoPubMedLINC00240
iHOPLINC00240
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:51 CEST 2017

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