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LINC00243 (long intergenic non-protein coding RNA 243)

Identity

Alias_namesC6orf214
NCRNA00243
chromosome 6 open reading frame 214 (putative)
non-protein coding RNA 243
Alias_symbol (synonym)bQB230F21.2
FLJ40693
bQB10J12.2
Other alias
HGNC (Hugo) LINC00243
LocusID (NCBI) 401247
Atlas_Id 65326
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30812866 and ends at 30830659 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00243   30956
Cards
Entrez_Gene (NCBI)LINC00243  401247  long intergenic non-protein coding RNA 243
AliasesC6orf214; NCRNA00243
GeneCards (Weizmann)LINC00243
Ensembl hg19 (Hinxton)ENSG00000214894 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214894 [Gene_View]  chr6:30812866-30830659 [Contig_View]  LINC00243 [Vega]
ICGC DataPortalENSG00000214894
TCGA cBioPortalLINC00243
AceView (NCBI)LINC00243
Genatlas (Paris)LINC00243
WikiGenes401247
SOURCE (Princeton)LINC00243
Genetics Home Reference (NIH)LINC00243
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00243  -     chr6:30812866-30830659 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00243  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblLINC00243 - 6p21.33 [CytoView hg19]  LINC00243 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBILINC00243 [Mapview hg19]  LINC00243 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098012
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LINC00243
Alternative Splicing GalleryENSG00000214894
Gene ExpressionLINC00243 [ NCBI-GEO ]   LINC00243 [ EBI - ARRAY_EXPRESS ]   LINC00243 [ SEEK ]   LINC00243 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00243 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401247
GTEX Portal (Tissue expression)LINC00243
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00243
DMDM Disease mutations401247
Blocks (Seattle)LINC00243
Human Protein AtlasENSG00000214894
Protein Interaction databases
FunCoupENSG00000214894
BioGRIDLINC00243
STRING (EMBL)LINC00243
ZODIACLINC00243
Ontologies - Pathways
Huge Navigator LINC00243 [HugePedia]
snp3D : Map Gene to Disease401247
BioCentury BCIQLINC00243
ClinGenLINC00243
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401247
Chemical/Pharm GKB GenePA134908460
Clinical trialLINC00243
Miscellaneous
canSAR (ICR)LINC00243 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00243
EVEXLINC00243
GoPubMedLINC00243
iHOPLINC00243
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:51 CEST 2017

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