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LINC002481 (long intergenic non-protein coding RNA 2481)

Identity

Other alias-
HGNC (Hugo) LINC002481
LocusID (NCBI) 339988
Atlas_Id 79846
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 6687448 and ends at 6690519 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC002481   27958
Cards
Entrez_Gene (NCBI)LINC002481  339988  long intergenic non-protein coding RNA 2481
Aliases
GeneCards (Weizmann)LINC002481
Ensembl hg19 (Hinxton)ENSG00000246526 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246526 [Gene_View]  ENSG00000246526 [Sequence]  chr4:6687448-6690519 [Contig_View]  LINC002481 [Vega]
ICGC DataPortalENSG00000246526
TCGA cBioPortalLINC002481
AceView (NCBI)LINC002481
Genatlas (Paris)LINC002481
WikiGenes339988
SOURCE (Princeton)LINC002481
Genetics Home Reference (NIH)LINC002481
Genomic and cartography
GoldenPath hg38 (UCSC)LINC002481  -     chr4:6687448-6690519 -  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC002481  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC002481 - 4p16.1 [CytoView hg19]  LINC002481 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC002481 [Mapview hg19]  LINC002481 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC002481
Cluster EST : UnigeneHs.434746 [ NCBI ]
CGAP (NCI)Hs.434746
Alternative Splicing GalleryENSG00000246526
Gene ExpressionLINC002481 [ NCBI-GEO ]   LINC002481 [ EBI - ARRAY_EXPRESS ]   LINC002481 [ SEEK ]   LINC002481 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC002481 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339988
GTEX Portal (Tissue expression)LINC002481
Human Protein AtlasENSG00000246526-LINC002481 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC002481
DMDM Disease mutations339988
Blocks (Seattle)LINC002481
Human Protein Atlas [tissue]ENSG00000246526-LINC002481 [tissue]
Protein Interaction databases
FunCoupENSG00000246526
BioGRIDLINC002481
STRING (EMBL)LINC002481
ZODIACLINC002481
Ontologies - Pathways
Huge Navigator LINC002481 [HugePedia]
snp3D : Map Gene to Disease339988
BioCentury BCIQLINC002481
ClinGenLINC002481
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339988
Clinical trialLINC002481
Miscellaneous
canSAR (ICR)LINC002481 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC002481
EVEXLINC002481
GoPubMedLINC002481
iHOPLINC002481
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:52:23 CEST 2018

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