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LINC00251 (long intergenic non-protein coding RNA 251)

Identity

Alias_namesC8orf25
NCRNA00251
chromosome 8 open reading frame 25
non-protein coding RNA 251
Other alias
HGNC (Hugo) LINC00251
LocusID (NCBI) 552859
Atlas_Id 65328
Location 8q13.1  [Link to chromosome band 8q13]
Location_base_pair Starts at 65161145 and ends at 65180340 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00251   31950
Cards
Entrez_Gene (NCBI)LINC00251  552859  long intergenic non-protein coding RNA 251
AliasesC8orf25; NCRNA00251
GeneCards (Weizmann)LINC00251
Ensembl hg19 (Hinxton)ENSG00000280725 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280725 [Gene_View]  chr8:65161145-65180340 [Contig_View]  LINC00251 [Vega]
ICGC DataPortalENSG00000280725
TCGA cBioPortalLINC00251
AceView (NCBI)LINC00251
Genatlas (Paris)LINC00251
WikiGenes552859
SOURCE (Princeton)LINC00251
Genetics Home Reference (NIH)LINC00251
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00251  -     chr8:65161145-65180340 -  8q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00251  -     8q13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00251 - 8q13.1 [CytoView hg19]  LINC00251 - 8q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC00251 [Mapview hg19]  LINC00251 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW118206 BX110670
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00251
Cluster EST : UnigeneHs.156997 [ NCBI ]
CGAP (NCI)Hs.156997
Alternative Splicing GalleryENSG00000280725
Gene ExpressionLINC00251 [ NCBI-GEO ]   LINC00251 [ EBI - ARRAY_EXPRESS ]   LINC00251 [ SEEK ]   LINC00251 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00251 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)552859
GTEX Portal (Tissue expression)LINC00251
Human Protein AtlasENSG00000280725-LINC00251 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00251
DMDM Disease mutations552859
Blocks (Seattle)LINC00251
Human Protein Atlas [tissue]ENSG00000280725-LINC00251 [tissue]
Protein Interaction databases
FunCoupENSG00000280725
BioGRIDLINC00251
STRING (EMBL)LINC00251
ZODIACLINC00251
Ontologies - Pathways
Huge Navigator LINC00251 [HugePedia]
snp3D : Map Gene to Disease552859
BioCentury BCIQLINC00251
ClinGenLINC00251
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD552859
Chemical/Pharm GKB GenePA165585763
Clinical trialLINC00251
Miscellaneous
canSAR (ICR)LINC00251 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00251
EVEXLINC00251
GoPubMedLINC00251
iHOPLINC00251
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:18 CET 2017

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