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LINC00260 (long intergenic non-protein coding RNA 260)

Identity

Alias_namesC1orf217
NCRNA00260
chromosome 1 open reading frame 217
non-protein coding RNA 260
Alias_symbol (synonym)MGC5457
Other alias
HGNC (Hugo) LINC00260
LocusID (NCBI) 84719
Atlas_Id 65330
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 203730577 and ends at 203731851 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00260   28770
Cards
Entrez_Gene (NCBI)LINC00260  84719  long intergenic non-protein coding RNA 260
AliasesC1orf217; NCRNA00260
GeneCards (Weizmann)LINC00260
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:203730577-203731851 [Contig_View]  LINC00260 [Vega]
TCGA cBioPortalLINC00260
AceView (NCBI)LINC00260
Genatlas (Paris)LINC00260
WikiGenes84719
SOURCE (Princeton)LINC00260
Genetics Home Reference (NIH)LINC00260
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00260  -     chr1:203730577-203731851 +  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00260  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00260 - 1q32.1 [CytoView hg19]  LINC00260 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC00260 [Mapview hg19]  LINC00260 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC000988
RefSeq transcript (Entrez)NM_032633
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00260
Cluster EST : UnigeneHs.661178 [ NCBI ]
CGAP (NCI)Hs.661178
Gene ExpressionLINC00260 [ NCBI-GEO ]   LINC00260 [ EBI - ARRAY_EXPRESS ]   LINC00260 [ SEEK ]   LINC00260 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00260 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84719
GTEX Portal (Tissue expression)LINC00260
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00260
DMDM Disease mutations84719
Blocks (Seattle)LINC00260
IPIIPI00013291   
Protein Interaction databases
BioGRIDLINC00260
STRING (EMBL)LINC00260
ZODIACLINC00260
Ontologies - Pathways
Huge Navigator LINC00260 [HugePedia]
snp3D : Map Gene to Disease84719
BioCentury BCIQLINC00260
ClinGenLINC00260
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84719
Clinical trialLINC00260
Miscellaneous
canSAR (ICR)LINC00260 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00260
EVEXLINC00260
GoPubMedLINC00260
iHOPLINC00260
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:08 CEST 2017

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