Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00272 (long intergenic non-protein coding RNA 272)

Identity

Alias (NCBI)C1orf120
NCRNA00272
HGNC (Hugo) LINC00272
HGNC Alias symbRP1-223H12.3
HGNC Previous nameC1orf120
 NCRNA00272
HGNC Previous namechromosome 1 open reading frame 120
 non-protein coding RNA 272
LocusID (NCBI) 388719
Atlas_Id 65339
Location 1q25.3  [Link to chromosome band 1q25]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00272   26898
Cards
Entrez_Gene (NCBI)LINC00272    long intergenic non-protein coding RNA 272
AliasesC1orf120; NCRNA00272
GeneCards (Weizmann)LINC00272
Ensembl hg19 (Hinxton)ENSG00000203729 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203729 [Gene_View]  ENSG00000203729 [Sequence]  - [Contig_View]  LINC00272 [Vega]
ICGC DataPortalENSG00000203729
TCGA cBioPortalLINC00272
AceView (NCBI)LINC00272
Genatlas (Paris)LINC00272
SOURCE (Princeton)LINC00272
Genetics Home Reference (NIH)LINC00272
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00272  -  
GoldenPath hg19 (UCSC)LINC00272  -  
GoldenPathLINC00272 - [CytoView hg19]  LINC00272 - [CytoView hg38]
ImmunoBaseENSG00000203729
genome Data Viewer NCBILINC00272 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF508909 BC140780
RefSeq transcript (Entrez)NM_001010899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00272
Alternative Splicing GalleryENSG00000203729
Gene ExpressionLINC00272 [ NCBI-GEO ]   LINC00272 [ EBI - ARRAY_EXPRESS ]   LINC00272 [ SEEK ]   LINC00272 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00272 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00272 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388719
GTEX Portal (Tissue expression)LINC00272
Human Protein AtlasENSG00000203729-LINC00272 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00272
Blocks (Seattle)LINC00272
Human Protein Atlas [tissue]ENSG00000203729-LINC00272 [tissue]
HPRD17987
IPIIPI00374777   
Protein Interaction databases
BioGRIDLINC00272
STRING (EMBL)LINC00272
ZODIACLINC00272
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00272
EVEXLINC00272
GoPubMedLINC00272
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:00:05 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.