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LINC00272 (long intergenic non-protein coding RNA 272)

Identity

Alias_namesC1orf120
NCRNA00272
chromosome 1 open reading frame 120
non-protein coding RNA 272
Alias_symbol (synonym)RP1-223H12.3
Other alias
HGNC (Hugo) LINC00272
LocusID (NCBI) 388719
Atlas_Id 65339
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 182407621 and ends at 182414813 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00272   26898
Cards
Entrez_Gene (NCBI)LINC00272  388719  long intergenic non-protein coding RNA 272
AliasesC1orf120; NCRNA00272
GeneCards (Weizmann)LINC00272
Ensembl hg19 (Hinxton)ENSG00000203729 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203729 [Gene_View]  chr1:182407621-182414813 [Contig_View]  LINC00272 [Vega]
ICGC DataPortalENSG00000203729
TCGA cBioPortalLINC00272
AceView (NCBI)LINC00272
Genatlas (Paris)LINC00272
WikiGenes388719
SOURCE (Princeton)LINC00272
Genetics Home Reference (NIH)LINC00272
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00272  -     chr1:182407621-182414813 +  1q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00272  -     1q25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00272 - 1q25.3 [CytoView hg19]  LINC00272 - 1q25.3 [CytoView hg38]
Mapping of homologs : NCBILINC00272 [Mapview hg19]  LINC00272 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF508909 BC140780
RefSeq transcript (Entrez)NM_001010899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00272
Cluster EST : UnigeneHs.508989 [ NCBI ]
CGAP (NCI)Hs.508989
Alternative Splicing GalleryENSG00000203729
Gene ExpressionLINC00272 [ NCBI-GEO ]   LINC00272 [ EBI - ARRAY_EXPRESS ]   LINC00272 [ SEEK ]   LINC00272 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00272 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388719
GTEX Portal (Tissue expression)LINC00272
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00272
DMDM Disease mutations388719
Blocks (Seattle)LINC00272
Human Protein AtlasENSG00000203729
HPRD17987
IPIIPI00374777   
Protein Interaction databases
FunCoupENSG00000203729
BioGRIDLINC00272
STRING (EMBL)LINC00272
ZODIACLINC00272
Ontologies - Pathways
Huge Navigator LINC00272 [HugePedia]
snp3D : Map Gene to Disease388719
BioCentury BCIQLINC00272
ClinGenLINC00272
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388719
Chemical/Pharm GKB GenePA165752123
Clinical trialLINC00272
Miscellaneous
canSAR (ICR)LINC00272 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00272
EVEXLINC00272
GoPubMedLINC00272
iHOPLINC00272
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:12:53 CEST 2017

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