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LINC00273 (long intergenic non-protein coding RNA 273)

Identity

Alias_namesNCRNA00273
non-protein coding RNA 273
Alias_symbol (synonym)TOP
NCRNA00273-1
Other alias
HGNC (Hugo) LINC00273
LocusID (NCBI) 649159
Atlas_Id 65340
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 34158585 and ends at 34160036 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00273   38595
Cards
Entrez_Gene (NCBI)LINC00273  649159  long intergenic non-protein coding RNA 273
AliasesNCRNA00273; TOP
GeneCards (Weizmann)LINC00273
Ensembl hg19 (Hinxton)ENSG00000256642 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256642 [Gene_View]  chr16:34158585-34160036 [Contig_View]  LINC00273 [Vega]
ICGC DataPortalENSG00000256642
TCGA cBioPortalLINC00273
AceView (NCBI)LINC00273
Genatlas (Paris)LINC00273
WikiGenes649159
SOURCE (Princeton)LINC00273
Genetics Home Reference (NIH)LINC00273
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00273  -     chr16:34158585-34160036 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00273  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00273 - 16p11.2 [CytoView hg19]  LINC00273 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBILINC00273 [Mapview hg19]  LINC00273 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY587847
RefSeq transcript (Entrez)NM_001040069
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00273
Cluster EST : UnigeneHs.532675 [ NCBI ]
CGAP (NCI)Hs.532675
Alternative Splicing GalleryENSG00000256642
Gene ExpressionLINC00273 [ NCBI-GEO ]   LINC00273 [ EBI - ARRAY_EXPRESS ]   LINC00273 [ SEEK ]   LINC00273 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00273 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)649159
GTEX Portal (Tissue expression)LINC00273
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00273
DMDM Disease mutations649159
Blocks (Seattle)LINC00273
Human Protein AtlasENSG00000256642
IPIIPI00450358   
Protein Interaction databases
FunCoupENSG00000256642
BioGRIDLINC00273
STRING (EMBL)LINC00273
ZODIACLINC00273
Ontologies - Pathways
Huge Navigator LINC00273 [HugePedia]
snp3D : Map Gene to Disease649159
BioCentury BCIQLINC00273
ClinGenLINC00273
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD649159
Chemical/Pharm GKB GenePA165450271
Clinical trialLINC00273
Miscellaneous
canSAR (ICR)LINC00273 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00273
EVEXLINC00273
GoPubMedLINC00273
iHOPLINC00273
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:53 CEST 2017

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