Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00276 (long intergenic non-protein coding RNA 276)

Identity

Alias_namesNCRNA00276
non-protein coding RNA 276
Other alias
HGNC (Hugo) LINC00276
LocusID (NCBI) 100499171
Atlas_Id 65341
Location 2p24.3  [Link to chromosome band 2p24]
Location_base_pair Starts at 14228874 and ends at 14400958 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00276   38663
Cards
Entrez_Gene (NCBI)LINC00276  100499171  long intergenic non-protein coding RNA 276
AliasesNCRNA00276
GeneCards (Weizmann)LINC00276
Ensembl hg19 (Hinxton)ENSG00000230448 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230448 [Gene_View]  chr2:14228874-14400958 [Contig_View]  LINC00276 [Vega]
ICGC DataPortalENSG00000230448
TCGA cBioPortalLINC00276
AceView (NCBI)LINC00276
Genatlas (Paris)LINC00276
WikiGenes100499171
SOURCE (Princeton)LINC00276
Genetics Home Reference (NIH)LINC00276
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00276  -     chr2:14228874-14400958 -  2p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00276  -     2p24.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00276 - 2p24.3 [CytoView hg19]  LINC00276 - 2p24.3 [CytoView hg38]
Mapping of homologs : NCBILINC00276 [Mapview hg19]  LINC00276 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035112
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00276
Cluster EST : UnigeneHs.565606 [ NCBI ]
CGAP (NCI)Hs.565606
Alternative Splicing GalleryENSG00000230448
Gene ExpressionLINC00276 [ NCBI-GEO ]   LINC00276 [ EBI - ARRAY_EXPRESS ]   LINC00276 [ SEEK ]   LINC00276 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00276 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100499171
GTEX Portal (Tissue expression)LINC00276
Human Protein AtlasENSG00000230448-LINC00276 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00276
DMDM Disease mutations100499171
Blocks (Seattle)LINC00276
Human Protein Atlas [tissue]ENSG00000230448-LINC00276 [tissue]
Protein Interaction databases
FunCoupENSG00000230448
BioGRIDLINC00276
STRING (EMBL)LINC00276
ZODIACLINC00276
Ontologies - Pathways
Huge Navigator LINC00276 [HugePedia]
snp3D : Map Gene to Disease100499171
BioCentury BCIQLINC00276
ClinGenLINC00276
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100499171
Chemical/Pharm GKB GenePA165697088
Clinical trialLINC00276
Miscellaneous
canSAR (ICR)LINC00276 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Cobe═ineLINC00276
EVEXLINC00276
GoPubMedLINC00276
iHOPLINC00276
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:53:54 CET 2017

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