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LINC00280 (long intergenic non-protein coding RNA 280)

Identity

Alias_namesNCRNA00280
non-protein coding RNA 280
Other alias
HGNC (Hugo) LINC00280
LocusID (NCBI) 100873964
Atlas_Id 65343
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 6225260 and ends at 6229454 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00280   38803
Cards
Entrez_Gene (NCBI)LINC00280  100873964  long intergenic non-protein coding RNA 280
AliasesNCRNA00280
GeneCards (Weizmann)LINC00280
Ensembl hg19 (Hinxton)ENSG00000229643 [Gene_View]  chrY:6225260-6229454 [Contig_View]  LINC00280 [Vega]
Ensembl hg38 (Hinxton)ENSG00000229643 [Gene_View]  chrY:6225260-6229454 [Contig_View]  LINC00280 [Vega]
ICGC DataPortalENSG00000229643
TCGA cBioPortalLINC00280
AceView (NCBI)LINC00280
Genatlas (Paris)LINC00280
WikiGenes100873964
SOURCE (Princeton)LINC00280
Genetics Home Reference (NIH)LINC00280
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00280  -     chrY:6225260-6229454 -  Yp11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00280  -     Yp11.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00280 - Yp11.2 [CytoView hg19]  LINC00280 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBILINC00280 [Mapview hg19]  LINC00280 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA431552 HG512811
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000024 NT_011896
Consensus coding sequences : CCDS (NCBI)LINC00280
Cluster EST : UnigeneHs.584731 [ NCBI ]
CGAP (NCI)Hs.584731
Alternative Splicing GalleryENSG00000229643
Gene ExpressionLINC00280 [ NCBI-GEO ]   LINC00280 [ EBI - ARRAY_EXPRESS ]   LINC00280 [ SEEK ]   LINC00280 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00280 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873964
GTEX Portal (Tissue expression)LINC00280
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00280
DMDM Disease mutations100873964
Blocks (Seattle)LINC00280
Human Protein AtlasENSG00000229643
Protein Interaction databases
FunCoupENSG00000229643
BioGRIDLINC00280
STRING (EMBL)LINC00280
ZODIACLINC00280
Ontologies - Pathways
Huge Navigator LINC00280 [HugePedia]
snp3D : Map Gene to Disease100873964
BioCentury BCIQLINC00280
ClinGenLINC00280
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873964
Clinical trialLINC00280
Miscellaneous
canSAR (ICR)LINC00280 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00280
EVEXLINC00280
GoPubMedLINC00280
iHOPLINC00280
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:11:20 CET 2017

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