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LINC00302 (long intergenic non-protein coding RNA 302)

Identity

Alias_namesC1orf46
NCRNA00302
chromosome 1 open reading frame 46
non-protein coding RNA 302
Alias_symbol (synonym)XP33
Other aliasxp33
HGNC (Hugo) LINC00302
LocusID (NCBI) 388699
Atlas_Id 65353
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 152655477 and ends at 152656804 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00302   31825
Cards
Entrez_Gene (NCBI)LINC00302  388699  long intergenic non-protein coding RNA 302
AliasesC1orf46; NCRNA00302; xp33
GeneCards (Weizmann)LINC00302
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:152655477-152656804 [Contig_View]  LINC00302 [Vega]
TCGA cBioPortalLINC00302
AceView (NCBI)LINC00302
Genatlas (Paris)LINC00302
WikiGenes388699
SOURCE (Princeton)LINC00302
Genetics Home Reference (NIH)LINC00302
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00302  -     chr1:152655477-152656804 +  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00302  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00302 - 1q21.3 [CytoView hg19]  LINC00302 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBILINC00302 [Mapview hg19]  LINC00302 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF005082
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00302
Cluster EST : UnigeneHs.516420 [ NCBI ]
CGAP (NCI)Hs.516420
Gene ExpressionLINC00302 [ NCBI-GEO ]   LINC00302 [ EBI - ARRAY_EXPRESS ]   LINC00302 [ SEEK ]   LINC00302 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00302 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388699
GTEX Portal (Tissue expression)LINC00302
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00302
DMDM Disease mutations388699
Blocks (Seattle)LINC00302
IPIIPI00397802   
Protein Interaction databases
BioGRIDLINC00302
STRING (EMBL)LINC00302
ZODIACLINC00302
Ontologies - Pathways
Huge Navigator LINC00302 [HugePedia]
snp3D : Map Gene to Disease388699
BioCentury BCIQLINC00302
ClinGenLINC00302
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388699
Chemical/Pharm GKB GenePA134941697
Clinical trialLINC00302
Miscellaneous
canSAR (ICR)LINC00302 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00302
EVEXLINC00302
GoPubMedLINC00302
iHOPLINC00302
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:00:46 CET 2017

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