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LINC00307 (long intergenic non-protein coding RNA 307)

Identity

Alias_namesNCRNA00307
non-protein coding RNA 307
Alias_symbol (synonym)D21S2091E
Other alias
HGNC (Hugo) LINC00307
LocusID (NCBI) 266919
Atlas_Id 65357
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 30209151 and ends at 30211783 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00307   16727
Cards
Entrez_Gene (NCBI)LINC00307  266919  long intergenic non-protein coding RNA 307
AliasesD21S2091E; NCRNA00307
GeneCards (Weizmann)LINC00307
Ensembl hg19 (Hinxton)ENSG00000227342 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227342 [Gene_View]  chr21:30209151-30211783 [Contig_View]  LINC00307 [Vega]
ICGC DataPortalENSG00000227342
TCGA cBioPortalLINC00307
AceView (NCBI)LINC00307
Genatlas (Paris)LINC00307
WikiGenes266919
SOURCE (Princeton)LINC00307
Genetics Home Reference (NIH)LINC00307
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00307  -     chr21:30209151-30211783 -  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00307  -     21q22.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00307 - 21q22.11 [CytoView hg19]  LINC00307 - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBILINC00307 [Mapview hg19]  LINC00307 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY063455
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00307
Cluster EST : UnigeneHs.561028 [ NCBI ]
CGAP (NCI)Hs.561028
Alternative Splicing GalleryENSG00000227342
Gene ExpressionLINC00307 [ NCBI-GEO ]   LINC00307 [ EBI - ARRAY_EXPRESS ]   LINC00307 [ SEEK ]   LINC00307 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00307 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)266919
GTEX Portal (Tissue expression)LINC00307
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00307
DMDM Disease mutations266919
Blocks (Seattle)LINC00307
Human Protein AtlasENSG00000227342
Protein Interaction databases
FunCoupENSG00000227342
BioGRIDLINC00307
STRING (EMBL)LINC00307
ZODIACLINC00307
Ontologies - Pathways
Huge Navigator LINC00307 [HugePedia]
snp3D : Map Gene to Disease266919
BioCentury BCIQLINC00307
ClinGenLINC00307
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD266919
Clinical trialLINC00307
Miscellaneous
canSAR (ICR)LINC00307 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00307
EVEXLINC00307
GoPubMedLINC00307
iHOPLINC00307
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:19:51 CEST 2017

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