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LINC00319 (long intergenic non-protein coding RNA 319)

Identity

Alias_namesC21orf125
NCRNA00319
chromosome 21 open reading frame 125
non-protein coding RNA 319
Alias_symbol (synonym)PRED49
FLJ38036
Other alias
HGNC (Hugo) LINC00319
LocusID (NCBI) 284836
Atlas_Id 65367
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 43446601 and ends at 43453885 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00319   19730
Cards
Entrez_Gene (NCBI)LINC00319  284836  long intergenic non-protein coding RNA 319
AliasesC21orf125; NCRNA00319; PRED49
GeneCards (Weizmann)LINC00319
Ensembl hg19 (Hinxton)ENSG00000188660 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188660 [Gene_View]  chr21:43446601-43453885 [Contig_View]  LINC00319 [Vega]
ICGC DataPortalENSG00000188660
TCGA cBioPortalLINC00319
AceView (NCBI)LINC00319
Genatlas (Paris)LINC00319
WikiGenes284836
SOURCE (Princeton)LINC00319
Genetics Home Reference (NIH)LINC00319
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00319  -     chr21:43446601-43453885 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00319  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00319 - 21q22.3 [CytoView hg19]  LINC00319 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00319 [Mapview hg19]  LINC00319 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095355 AK128444 AW294163 BC128187 BC128188
RefSeq transcript (Entrez)NM_194309
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00319
Cluster EST : UnigeneHs.146127 [ NCBI ]
CGAP (NCI)Hs.146127
Alternative Splicing GalleryENSG00000188660
Gene ExpressionLINC00319 [ NCBI-GEO ]   LINC00319 [ EBI - ARRAY_EXPRESS ]   LINC00319 [ SEEK ]   LINC00319 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00319 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284836
GTEX Portal (Tissue expression)LINC00319
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00319
DMDM Disease mutations284836
Blocks (Seattle)LINC00319
Human Protein AtlasENSG00000188660
HPRD10738
IPIIPI00647221   
Protein Interaction databases
FunCoupENSG00000188660
BioGRIDLINC00319
STRING (EMBL)LINC00319
ZODIACLINC00319
Ontologies - Pathways
Huge Navigator LINC00319 [HugePedia]
snp3D : Map Gene to Disease284836
BioCentury BCIQLINC00319
ClinGenLINC00319
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284836
Chemical/Pharm GKB GenePA134868446
Clinical trialLINC00319
Miscellaneous
canSAR (ICR)LINC00319 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00319
EVEXLINC00319
GoPubMedLINC00319
iHOPLINC00319
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:57 CEST 2017

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