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LINC00323 (long intergenic non-protein coding RNA 323)

Identity

Alias_namesC21orf130
NCRNA00323
chromosome 21 open reading frame 130
non-protein coding RNA 323
Alias_symbol (synonym)PRED42
FLJ37173
Other alias
HGNC (Hugo) LINC00323
LocusID (NCBI) 284835
Atlas_Id 65370
Location 21q22.2  [Link to chromosome band 21q22]
Location_base_pair Starts at 41141500 and ends at 41148064 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00323   19720
Cards
Entrez_Gene (NCBI)LINC00323  284835  long intergenic non-protein coding RNA 323
AliasesC21orf130; NCRNA00323; PRED42
GeneCards (Weizmann)LINC00323
Ensembl hg19 (Hinxton)ENSG00000226496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226496 [Gene_View]  chr21:41141500-41148064 [Contig_View]  LINC00323 [Vega]
ICGC DataPortalENSG00000226496
TCGA cBioPortalLINC00323
AceView (NCBI)LINC00323
Genatlas (Paris)LINC00323
WikiGenes284835
SOURCE (Princeton)LINC00323
Genetics Home Reference (NIH)LINC00323
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00323  -     chr21:41141500-41148064 -  21q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00323  -     21q22.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00323 - 21q22.2 [CytoView hg19]  LINC00323 - 21q22.2 [CytoView hg38]
Mapping of homologs : NCBILINC00323 [Mapview hg19]  LINC00323 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094492
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00323
Cluster EST : UnigeneHs.106234 [ NCBI ]
CGAP (NCI)Hs.106234
Alternative Splicing GalleryENSG00000226496
Gene ExpressionLINC00323 [ NCBI-GEO ]   LINC00323 [ EBI - ARRAY_EXPRESS ]   LINC00323 [ SEEK ]   LINC00323 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00323 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284835
GTEX Portal (Tissue expression)LINC00323
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00323
DMDM Disease mutations284835
Blocks (Seattle)LINC00323
Human Protein AtlasENSG00000226496
IPIIPI00644059   
Protein Interaction databases
FunCoupENSG00000226496
BioGRIDLINC00323
STRING (EMBL)LINC00323
ZODIACLINC00323
Ontologies - Pathways
Huge Navigator LINC00323 [HugePedia]
snp3D : Map Gene to Disease284835
BioCentury BCIQLINC00323
ClinGenLINC00323
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284835
Chemical/Pharm GKB GenePA134874142
Clinical trialLINC00323
Miscellaneous
canSAR (ICR)LINC00323 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00323
EVEXLINC00323
GoPubMedLINC00323
iHOPLINC00323
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:19:54 CEST 2017

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