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LINC00327 (long intergenic non-protein coding RNA 327)

Identity

Alias_namesNCRNA00327
non-protein coding RNA 327
Other alias
HGNC (Hugo) LINC00327
LocusID (NCBI) 100506697
Atlas_Id 65373
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 23469512 and ends at 23487464 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00327   42009
Cards
Entrez_Gene (NCBI)LINC00327  100506697  long intergenic non-protein coding RNA 327
AliasesNCRNA00327
GeneCards (Weizmann)LINC00327
Ensembl hg19 (Hinxton)ENSG00000232977 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232977 [Gene_View]  chr13:23469512-23487464 [Contig_View]  LINC00327 [Vega]
ICGC DataPortalENSG00000232977
TCGA cBioPortalLINC00327
AceView (NCBI)LINC00327
Genatlas (Paris)LINC00327
WikiGenes100506697
SOURCE (Princeton)LINC00327
Genetics Home Reference (NIH)LINC00327
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00327  -     chr13:23469512-23487464 +  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00327  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblLINC00327 - 13q12.12 [CytoView hg19]  LINC00327 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBILINC00327 [Mapview hg19]  LINC00327 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL833146 AY927572 AY927579 BX098743
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00327
Cluster EST : UnigeneHs.50118 [ NCBI ]
CGAP (NCI)Hs.50118
Alternative Splicing GalleryENSG00000232977
Gene ExpressionLINC00327 [ NCBI-GEO ]   LINC00327 [ EBI - ARRAY_EXPRESS ]   LINC00327 [ SEEK ]   LINC00327 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00327 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506697
GTEX Portal (Tissue expression)LINC00327
Human Protein AtlasENSG00000232977-LINC00327 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00327
DMDM Disease mutations100506697
Blocks (Seattle)LINC00327
Human Protein Atlas [tissue]ENSG00000232977-LINC00327 [tissue]
Protein Interaction databases
FunCoupENSG00000232977
BioGRIDLINC00327
STRING (EMBL)LINC00327
ZODIACLINC00327
Ontologies - Pathways
Huge Navigator LINC00327 [HugePedia]
snp3D : Map Gene to Disease100506697
BioCentury BCIQLINC00327
ClinGenLINC00327
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506697
Clinical trialLINC00327
Miscellaneous
canSAR (ICR)LINC00327 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00327
EVEXLINC00327
GoPubMedLINC00327
iHOPLINC00327
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:06 CET 2017

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